RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NFE2L2Q16236 605 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 PKN2Q16513 984 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 MOGQ16653 247 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ZC2HC1CQ53FD0 456 aaPredicted RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 PPP4R4Q6NUP7 873 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 EMBQ6PCB8 327 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 TRIM67Q6ZTA4 783 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 TBC1D1Q86TI0 1168 aaPredicted RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 SPATA2LQ8IUW3 424 aaPredicted RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 CSGALNACT2Q8N6G5 542 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 PAWRQ96IZ0 340 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 KIAA1683Q9H0B3 1180 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 DSEQ9UL01 958 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 PCDHGA11Q9Y5H2 935 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ARHGAP5Q13017 1502 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 ARAP3Q8WWN8 1544 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PNMA6EA0A0J9YXQ4 647 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 A0A1W2PRQ8 180 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 E9PBE3 544 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 H3BUI4 141 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 TSPAN9O75954 239 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PDE5AO76074 875 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 SRGNP10124 158 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 ZNF18P17022 549 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 RXRAP19793 462 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 RCVRNP35243 200 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PBX1P40424 430 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 MDH1P40925 334 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 AKAP17AQ02040 695 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 DPCR1Q3MIW9 517 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 AKAP4Q5JQC9 854 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 RASIP1Q5U651 963 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 TATDN1Q6P1N9 297 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 SLC30A10Q6XR72 485 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 DSTYKQ6XUX3 929 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 BBS5Q8N3I7 341 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 EIF1ADQ8N9N8 165 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 TSGA13Q96PP4 275 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 CCDC28BQ9BUN5 200 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 EHMT1Q9H9B1 1298 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 NKX1-2Q9UD57 310 aaPredicted RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 POLG2Q9UHN1 485 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PPP1R9AQ9ULJ8 1098 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 GOLGA8JA6NMD2 632 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 GOLGA8MH3BSY2 632 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 SNPHO15079 494 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 FOXP2O15409 715 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 ATP2C2O75185 946 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 FGF18O76093 207 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 S100A6P06703 90 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 CPA3P15088 417 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PSMA5P28066 241 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 GBP1P32455 592 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 HNF1BP35680 557 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 COPAP53621 1224 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 KCNJ2P63252 427 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 ATP8B2P98198 1209 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 MYL5Q02045 173 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 MTX1Q13505 466 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 EPHA7Q15375 998 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 TWISTNBQ3B726 338 aaPredicted RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 ARMC4Q5T2S8 1044 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 USP43Q70EL4 1123 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 FAM9CQ8IZT9 166 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 ATL1Q8WXF7 558 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PGBD4Q96DM1 585 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 HSPBAP1Q96EW2 488 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 CEP95Q96GE4 821 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 MOGAT1Q96PD6 335 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 SEC62Q99442 399 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 NEURL2Q9BR09 285 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 CHST12Q9NRB3 414 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PIH1D1Q9NWS0 290 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 MRC1P22897 1456 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 SALL1Q9NSC2 1324 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 BHMG1C9JSJ3 638 aaPredicted RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 E7EVH7 732 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 FARP2O94887 1054 aaPredicted RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 TJP3O95049 919 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 OR5F1O95221 314 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 FYNP06241 537 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 TFPTP0C1Z6 253 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PABPC1P11940 636 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 LIN52Q52LA3 116 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 SPECC1LQ69YQ0 1117 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 PHLDB2Q86SQ0 1253 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 SH2D3CQ8N5H7 860 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 LZTR1Q8N653 840 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 NAT14Q8WUY8 206 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 MRPS27Q92552 414 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 C19orf44Q9H6X5 657 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 WASH6PQ9NQA3 447 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 CNGB3Q9NQW8 809 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 GMIPQ9P107 970 aa5.61□□□□□ -1.51
HERC4-205ENST00000412272 HERC5Q9UII4 1024 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 AGO2Q9UKV8 859 aaKnown RBP5.61□□□□□ -1.51
HERC4-205ENST00000412272 HIP1O00291 1037 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 IFIT3O14879 490 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 VAV1P15498 845 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 KRT4P19013 534 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms