RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 ZNF75DP51815 510 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
SHANK2-204ENST00000409530 CAPSQ13938 189 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 COBLL1Q53SF7 1204 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 FAM47CQ5HY64 1035 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 DEPTORQ8TB45 409 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 BICD1Q96G01 975 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 CNOT6LQ96LI5 555 aaKnown RBP17.22■□□□□ 0.35
SHANK2-204ENST00000409530 SCLT1Q96NL6 688 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 VPS16Q9H269 839 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 SUCLA2Q9P2R7 463 aaPredicted RBP17.22■□□□□ 0.35
SHANK2-204ENST00000409530 NRBP1Q9UHY1 535 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 GINS2Q9Y248 185 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 PCDHB13Q9Y5F0 798 aa17.22■□□□□ 0.35
SHANK2-204ENST00000409530 GNRH1P01148 92 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 ZNF18P17022 549 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 NCKAP1LP55160 1127 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 UBASH3AP57075 661 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 PURAQ00577 322 aaKnown RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 CT47A1Q5JQC4 288 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 CDKAL1Q5VV42 579 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 SLAIN1Q8ND83 568 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 TMEM161BQ8NDZ6 487 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 PSPC1Q8WXF1 523 aaKnown RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 TRIP12Q14669 1992 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 EIF3DO15371 548 aaKnown RBP eCLIP17.21■□□□□ 0.352e-6■□□□□ 11
SHANK2-204ENST00000409530 CSDE1O75534 798 aaKnown RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 GJA9P57773 515 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 ZNF200P98182 395 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 LRRC63Q05C16 580 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 ZCWPW2Q504Y3 356 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 CEP135Q66GS9 1140 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 RNF149Q8NC42 400 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 ZNF507Q8TCN5 953 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 NAP1L5Q96NT1 182 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 PCIF1Q9H4Z3 704 aa17.21■□□□□ 0.35
SHANK2-204ENST00000409530 DDX20Q9UHI6 824 aaKnown RBP17.21■□□□□ 0.35
SHANK2-204ENST00000409530 ARL2P36404 184 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 MTIF2P46199 727 aaKnown RBP17.2■□□□□ 0.34
SHANK2-204ENST00000409530 LAMTOR4Q0VGL1 99 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 KRT31Q15323 416 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 CCDC40Q4G0X9 1142 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 TCP11X2Q5H9J9 407 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 MTHFD1LQ6UB35 978 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 IRF2BP1Q8IU81 584 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 RETREG2Q8NC44 543 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 PXYLP1Q8TE99 480 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 VTI1AQ96AJ9 217 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
SHANK2-204ENST00000409530 TGFB1I1O43294 461 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 CALUO43852 315 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-204ENST00000409530 ADAMTS4O75173 837 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 PPP1R37O75864 691 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 ADAM9Q13443 819 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 HIC1Q14526 733 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 LRRC55Q6ZSA7 311 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 HS2ST1Q7LGA3 356 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 C7orf31Q8N865 590 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 ACCSQ96QU6 501 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 GBP3Q9H0R5 595 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 Q9Y3F1 56 aa17.2■□□□□ 0.34
SHANK2-204ENST00000409530 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 HNRNPDLO14979 420 aaKnown RBP17.19■□□□□ 0.34
SHANK2-204ENST00000409530 NR3C1P04150 777 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 PTMAP06454 111 aaKnown RBP17.19■□□□□ 0.34
SHANK2-204ENST00000409530 ASGR1P07306 291 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 DNM2P50570 870 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 KCNA10Q16322 511 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 BMT2Q1RMZ1 405 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 MARCH8Q5T0T0 291 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 MAP3K21Q5TCX8 1036 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 NFRKBQ6P4R8 1299 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 TCP11Q8WWU5 503 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 THAP9Q9H5L6 903 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 HMX1Q9NP08 348 aaPredicted RBP17.19■□□□□ 0.34
SHANK2-204ENST00000409530 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 TBX20Q9UMR3 447 aa17.19■□□□□ 0.34
SHANK2-204ENST00000409530 MAPTP10636 758 aaKnown RBP17.18■□□□□ 0.34
SHANK2-204ENST00000409530 HARSP12081 509 aaKnown RBP17.18■□□□□ 0.34
SHANK2-204ENST00000409530 NAMPTP43490 491 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 CCDC173Q0VFZ6 552 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 PPP2R5AQ15172 486 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 SLC9C1Q4G0N8 1177 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 IER5Q5VY09 327 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 SARM1Q6SZW1 724 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 RDH13Q8NBN7 331 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 AGPAT3Q9NRZ7 376 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 CASP4P49662 377 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 GTF2BQ00403 316 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 FKBP3Q00688 224 aaKnown RBP17.18■□□□□ 0.34
SHANK2-204ENST00000409530 RUFY4Q6ZNE9 571 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 TAS1R3Q7RTX0 852 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 DNAJC5GQ8N7S2 189 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 ZSWIM2Q8NEG5 633 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
SHANK2-204ENST00000409530 CBWD1Q9BRT8 395 aa17.18■□□□□ 0.34
SHANK2-204ENST00000409530 KATNAL1Q9BW62 490 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms