RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 PCBP1Q15365 356 aaKnown RBP eCLIP16.39■□□□□ 0.21
SUMO1-207ENST00000409498 LRIT3Q3SXY7 679 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 ARSHQ5FYA8 562 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 FAM228AQ86W67 206 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 KSR1Q8IVT5 923 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 DAW1Q8N136 415 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 ASAP3Q8TDY4 903 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 NLRP7Q8WX94 980 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 KCNN1Q92952 543 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 RUSC1Q9BVN2 902 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 POLR3FQ9H1D9 316 aaPredicted RBP16.39■□□□□ 0.21
SUMO1-207ENST00000409498 MTIF3Q9H2K0 278 aaKnown RBP16.39■□□□□ 0.21
SUMO1-207ENST00000409498 CUEDC2Q9H467 287 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 GPRC5CQ9NQ84 441 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 BMP2KQ9NSY1 1161 aaPredicted RBP16.39■□□□□ 0.21
SUMO1-207ENST00000409498 MICAL3Q7RTP6 2002 aa16.39■□□□□ 0.21
SUMO1-207ENST00000409498 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 CD52P31358 61 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 MAPK7Q13164 816 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 PAK2Q13177 524 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 CAPSQ13938 189 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 MCM6Q14566 821 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 OTOP2Q7RTS6 562 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 RNF149Q8NC42 400 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 PHOSPHO2Q8TCD6 241 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 PYM1Q9BRP8 204 aaKnown RBP16.38■□□□□ 0.21
SUMO1-207ENST00000409498 NTPCRQ9BSD7 190 aaKnown RBP16.38■□□□□ 0.21
SUMO1-207ENST00000409498 FAM13BQ9NYF5 915 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 KCNG1Q9UIX4 513 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 ODF2LQ9ULJ1 636 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 ST3GAL5Q9UNP4 418 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 GINS2Q9Y248 185 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 HPSEQ9Y251 543 aa16.38■□□□□ 0.21
SUMO1-207ENST00000409498 NAMPTP43490 491 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 DSC3Q14574 896 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 PPP2R5AQ15172 486 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 FAM102BQ5T8I3 360 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
SUMO1-207ENST00000409498 IQUBQ8NA54 791 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 BSNDQ8WZ55 320 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 RNPC3Q96LT9 517 aaKnown RBP16.37■□□□□ 0.21
SUMO1-207ENST00000409498 DRC1Q96MC2 740 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 NLRP4Q96MN2 994 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 PPP1R16BQ96T49 567 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 TMX1Q9H3N1 280 aa16.37■□□□□ 0.21
SUMO1-207ENST00000409498 CXXC1Q9P0U4 656 aaPredicted RBP16.37■□□□□ 0.21
SUMO1-207ENST00000409498 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-207ENST00000409498 ENPP3O14638 875 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 HIP1RO75146 1068 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 SRGAP2CP0DJJ0 459 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 STAT6P42226 847 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 PHKA2P46019 1235 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 ZNF131P52739 623 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 WDR5P61964 334 aaKnown RBP16.36■□□□□ 0.21
SUMO1-207ENST00000409498 CLEC17AQ6ZS10 378 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 SV2BQ7L1I2 683 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 MAEAQ7L5Y9 396 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 RTN4RL1Q86UN2 441 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-207ENST00000409498 ZNF668Q96K58 619 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-207ENST00000409498 SLC9A7Q96T83 725 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 TSPYL2Q9H2G4 693 aaPredicted RBP16.36■□□□□ 0.21
SUMO1-207ENST00000409498 TNMDQ9H2S6 317 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 MAGEF1Q9HAY2 307 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 GDPD2Q9HCC8 539 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 CHST12Q9NRB3 414 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 KBTBD4Q9NVX7 518 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 KCNH3Q9ULD8 1083 aa16.36■□□□□ 0.21
SUMO1-207ENST00000409498 SSBP05455 408 aaKnown RBP eCLIP16.35■□□□□ 0.21
SUMO1-207ENST00000409498 SFPQP23246 707 aaKnown RBP eCLIP16.35■□□□□ 0.21
SUMO1-207ENST00000409498 NFX1Q12986 1120 aaKnown RBP16.35■□□□□ 0.21
SUMO1-207ENST00000409498 GIT2Q14161 759 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 FAM187BQ17R55 369 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 CNNM4Q6P4Q7 775 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 GPBP1Q86WP2 473 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 CRIPAKQ8N1N5 446 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 PDILTQ8N807 584 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 TMEM87AQ8NBN3 555 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 SPIRE2Q8WWL2 714 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 LINC01599Q8WXQ3 324 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 IFT74Q96LB3 600 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 SCLT1Q96NL6 688 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 TRAIPQ9BWF2 469 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 PANK2Q9BZ23 570 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 LRRC27Q9C0I9 530 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 C2orf40Q9H1Z8 148 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 FZD8Q9H461 694 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 MINDY3Q9H8M7 445 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 RGS18Q9NS28 235 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 USP25Q9UHP3 1055 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 SLC4A7Q9Y6M7 1214 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 PTPRSQ13332 1948 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 TTC3P53804 2025 aa16.35■□□□□ 0.21
SUMO1-207ENST00000409498 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.34■□□□□ 0.21
SUMO1-207ENST00000409498 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.34■□□□□ 0.21
SUMO1-207ENST00000409498 POLR2DO15514 142 aaKnown RBP16.34■□□□□ 0.21
SUMO1-207ENST00000409498 PLS3P13797 630 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 PFKFB1P16118 471 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 FAM189BP81408 668 aa16.34■□□□□ 0.21
SUMO1-207ENST00000409498 MBTD1Q05BQ5 628 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms