RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 SNRPNP63162 240 aaKnown RBP6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 HMGN5P82970 282 aaKnown RBP6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 SPEM2Q0P670 501 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 ORC1Q13415 861 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 KCNA10Q16322 511 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 PKN1Q16512 942 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 FSCN1Q16658 493 aaKnown RBP6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 C11orf91Q3C1V1 193 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 IER5Q5VY09 327 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 WWC2Q6AWC2 1192 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 CCSAPQ6IQ19 270 aaPredicted RBP6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 SLC39A5Q6ZMH5 540 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 ANKRD33Q7Z3H0 272 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 REXO1Q8N1G1 1221 aaKnown RBP6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 PPTC7Q8NI37 304 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 TBC1D5Q92609 795 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 DPF3Q92784 378 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 SENP6Q9GZR1 1112 aaPredicted RBP6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 BRMS1Q9HCU9 246 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 SRA1Q9HD15 236 aaKnown RBP6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 PCDHA6Q9UN73 950 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 PCDHA8Q9Y5H6 950 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 ASTN1O14525 1302 aa6.43□□□□□ -1.38
GAPDHP42-201ENST00000406848 DCDC2CA8MYV0 355 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 EIF1AYO14602 144 aaKnown RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 DYNC1LI2O43237 492 aaPredicted RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 PARNO95453 639 aaKnown RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 PGK1P00558 417 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 ASGR1P07306 291 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 HOXD8P13378 290 aaPredicted RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 HOXA13P31271 388 aaPredicted RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 CIITAP33076 1130 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 IRS1P35568 1242 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 SREBF1P36956 1147 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 ADCYAP1R1P41586 468 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 NLRP5P59047 1200 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 CCT2P78371 535 aaKnown RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 SETQ01105 290 aaPredicted RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 TRIM29Q14134 588 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 DGKDQ16760 1214 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 GJC2Q5T442 439 aaPredicted RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 EGFLAMQ63HQ2 1017 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 SDE2Q6IQ49 451 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 NFRKBQ6P4R8 1299 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 USP17L6PQ6QN14 398 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 MOXD1Q6UVY6 613 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 METTL7BQ6UX53 244 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 FBXO16Q8IX29 292 aaPredicted RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 DHX37Q8IY37 1157 aaKnown RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 CMTR1Q8N1G2 835 aaKnown RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 OR6J1Q8NGC5 347 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 GTF3C6Q969F1 213 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 TBC1D32Q96NH3 1257 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 MTG1Q9BT17 334 aaPredicted RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 SLC26A6Q9BXS9 759 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 ZSWIM4Q9H7M6 989 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 MLXIPQ9HAP2 919 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 JADE2Q9NQC1 790 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 AVENQ9NQS1 362 aaPredicted RBP6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 STARD7Q9NQZ5 370 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 COL20A1Q9P218 1284 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 TPCN1Q9ULQ1 816 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 PCDHA4Q9UN74 947 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 USP20Q9Y2K6 914 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 UBIAD1Q9Y5Z9 338 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 NFASCO94856 1347 aa6.42□□□□□ -1.38
GAPDHP42-201ENST00000406848 MCM3APO60318 1980 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 A0A1W2PQ45 241 aaPredicted RBP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 A0A1W2PQY0 241 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 ARVCFO00192 962 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 MEIS1O00470 390 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 CTAGE5O15320 804 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 MICAL2O94851 1124 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 MYCLP12524 364 aaPredicted RBP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 GCFC2P16383 781 aaKnown RBP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 HOXB4P17483 251 aaPredicted RBP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 AMPD1P23109 780 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 EIF4BP23588 611 aaKnown RBP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 BMP8BP34820 402 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 SLC26A2P50443 739 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 CDK7P50613 346 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 MRPS9P82933 396 aaKnown RBP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 SCRN1Q12765 414 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 MTMR1Q13613 665 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 COL9A3Q14050 684 aaPredicted RBP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 SAFBQ15424 915 aaKnown RBP eCLIP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 ME3Q16798 604 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 CEP55Q53EZ4 464 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 CELF3Q5SZQ8 465 aaKnown RBP6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 SEPT14Q6ZU15 432 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 EEPD1Q7L9B9 569 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 HS2ST1Q7LGA3 356 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 KRT25Q7Z3Z0 450 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 SESTD1Q86VW0 696 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 BLIDQ8IZY5 108 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 PIBF1Q8WXW3 757 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 IFT43Q96FT9 208 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 BTBD6Q96KE9 485 aa6.41□□□□□ -1.38
GAPDHP42-201ENST00000406848 MXRA8Q9BRK3 442 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms