RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 LRRC23Q53EV4 343 aaPredicted RBP12.83□□□□□ -0.36
SMCR8-201ENST00000406438 RMDN3Q96TC7 470 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 SEL1LQ9UBV2 794 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 SYNDIG1LA6NDD5 238 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 KRT4P19013 534 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 STXBP2Q15833 593 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 CLCA2Q9UQC9 943 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 VGLL3A8MV65 326 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 CCDC188H7C350 402 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 RASSF3Q86WH2 238 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 TMCO5AQ8N6Q1 288 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 C2orf69Q8N8R5 385 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 TBC1D9BQ66K14 1250 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 TSSK1BQ9BXA7 367 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 EDEM3Q9BZQ6 932 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 CEP152O94986 1710 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 GOLGA8IPA6NC78 632 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 GOLGA8JA6NMD2 632 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 ZSCAN9O15535 394 aaPredicted RBP12.83□□□□□ -0.36
SMCR8-201ENST00000406438 PRPF4O43172 522 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMCR8-201ENST00000406438 KCNQ3O43525 872 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 MMEP08473 750 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 STAP2Q9UGK3 403 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 WARS2Q9UGM6 360 aaKnown RBP12.83□□□□□ -0.36
SMCR8-201ENST00000406438 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
SMCR8-201ENST00000406438 DIAPH2O60879 1101 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 TAGAPQ8N103 731 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 STX19Q8N4C7 294 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 PIGOQ8TEQ8 1089 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 EXOC4Q96A65 974 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 ASIC4Q96FT7 647 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 PAGE5Q96GU1 130 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 MYH3P11055 1940 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 UGGT1Q9NYU2 1555 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 KLHL38Q2WGJ6 581 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 DDX50Q9BQ39 737 aaKnown RBP12.82□□□□□ -0.36
SMCR8-201ENST00000406438 SLC4A7Q9Y6M7 1214 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 ZNF189O75820 626 aaPredicted RBP12.82□□□□□ -0.36
SMCR8-201ENST00000406438 KRT7P08729 469 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 CTTNQ14247 550 aaKnown RBP12.82□□□□□ -0.36
SMCR8-201ENST00000406438 ICA1LQ8NDH6 482 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
SMCR8-201ENST00000406438 NFU1Q9UMS0 254 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 SH3KBP1Q96B97 665 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMCR8-201ENST00000406438 FEM1BQ9UK73 627 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
SMCR8-201ENST00000406438 ZNF263O14978 683 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 SEC31AO94979 1220 aaKnown RBP12.82□□□□□ -0.36
SMCR8-201ENST00000406438 HOXD10P28358 340 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 HDAC4P56524 1084 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 MED21Q13503 144 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 RRM2BQ7LG56 351 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 MAP3K20Q9NYL2 800 aaKnown RBP12.82□□□□□ -0.36
SMCR8-201ENST00000406438 ADA2Q9NZK5 511 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 E9PMD0 336 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 PI4K2BG5E9Z4 385 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 GOLGA8MH3BSY2 632 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 AP3B2Q13367 1082 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 EGFL8Q99944 293 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 TET3O43151 1660 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 GPC5P78333 572 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 POU5F1BQ06416 359 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 PKP1Q13835 747 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
SMCR8-201ENST00000406438 PALMO75781 387 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 KRT8P05787 483 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 CCNE1P24864 410 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 TTLL4Q14679 1199 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 LBRQ14739 615 aaKnown RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 C1orf146Q5VVC0 180 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 HEATR6Q6AI08 1181 aaKnown RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 HIPK4Q8NE63 616 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 PBXIP1Q96AQ6 731 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 GPBP1L1Q9HC44 474 aaPredicted RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 NDE1Q9NXR1 346 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 PRAMEP78395 509 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ADCK5Q3MIX3 580 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ZNF589Q86UQ0 364 aaPredicted RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ARIH2O95376 493 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ZFXP17010 805 aaPredicted RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 BLVRAP53004 296 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ALKBH5Q6P6C2 394 aaKnown RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 TMEM270Q6UE05 265 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 LCORLQ8N3X6 602 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ZFP69BQ9UJL9 534 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 CCDC85BQ15834 202 aaPredicted RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 OTULINQ96BN8 352 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 COA1Q9GZY4 146 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 YY1AP1Q9H869 796 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ARHGAP10A1A4S6 786 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms