RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 ECHDC2Q86YB7 292 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 LINC01465Q8N7H1 131 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 KREMEN2Q8NCW0 462 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 PHKBQ93100 1093 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 SNX21Q969T3 373 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 RIPOR3Q96MK2 946 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 ZNF577Q9BSK1 485 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 ADAMTS10Q9H324 1103 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 TBC1D22BQ9NU19 505 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 SPG21Q9NZD8 308 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 HCFC2Q9Y5Z7 792 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 DMDP11532 3685 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 MAGEB2O15479 319 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 XBP1P17861 261 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 NLRP11P59045 1033 aaKnown RBP20.19■□□□□ 0.82
HDAC11-204ENST00000404040 MTMR3Q13615 1198 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 SMC1AQ14683 1233 aaKnown RBP20.19■□□□□ 0.82
HDAC11-204ENST00000404040 CLLU1OSQ5K130 101 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 TRMT1LQ7Z2T5 733 aaKnown RBP20.19■□□□□ 0.82
HDAC11-204ENST00000404040 TMC7Q7Z402 723 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 CCDC83Q8IWF9 413 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 SLC39A11Q8N1S5 342 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 ATOH1Q92858 354 aaPredicted RBP20.19■□□□□ 0.82
HDAC11-204ENST00000404040 TMX3Q96JJ7 454 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 FAM167AQ96KS9 214 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 NECTIN4Q96NY8 510 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 MAP7D2Q96T17 732 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 POMKQ9H5K3 350 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 SORCS3Q9UPU3 1222 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 AKT3Q9Y243 479 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 PCDHA10Q9Y5I2 948 aa20.19■□□□□ 0.82
HDAC11-204ENST00000404040 C2orf71A6NGG8 1288 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 PSAPP07602 524 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 ZSCAN20P17040 1043 aaPredicted RBP20.18■□□□□ 0.82
HDAC11-204ENST00000404040 EIF4BP23588 611 aaKnown RBP20.18■□□□□ 0.82
HDAC11-204ENST00000404040 HMGN5P82970 282 aaKnown RBP20.18■□□□□ 0.82
HDAC11-204ENST00000404040 ITIH3Q06033 890 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 UBALD2Q8IYN6 164 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 MRPL43Q8N983 215 aaKnown RBP20.18■□□□□ 0.82
HDAC11-204ENST00000404040 ADAM7Q9H2U9 754 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 SH3GLB2Q9NR46 395 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 GABBR1Q9UBS5 961 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 TCEAL9Q9UHQ7 104 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 KIF3AQ9Y496 699 aa20.18■□□□□ 0.82
HDAC11-204ENST00000404040 ESYT2A0FGR8 921 aa20.17■□□□□ 0.82
HDAC11-204ENST00000404040 C2CD4DB7Z1M9 353 aa20.17■□□□□ 0.82
HDAC11-204ENST00000404040 GALR2O43603 387 aaPredicted RBP20.17■□□□□ 0.82
HDAC11-204ENST00000404040 CES5AQ6NT32 575 aa20.17■□□□□ 0.82
HDAC11-204ENST00000404040 EFCAB12Q6NXP0 572 aa20.17■□□□□ 0.82
HDAC11-204ENST00000404040 ZNF598Q86UK7 904 aaKnown RBP20.17■□□□□ 0.82
HDAC11-204ENST00000404040 ZNF710Q8N1W2 664 aa20.17■□□□□ 0.82
HDAC11-204ENST00000404040 LRRC71Q8N4P6 559 aa20.17■□□□□ 0.82
HDAC11-204ENST00000404040 RNF169Q8NCN4 708 aa20.17■□□□□ 0.82
HDAC11-204ENST00000404040 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
HDAC11-204ENST00000404040 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.17■□□□□ 0.82
HDAC11-204ENST00000404040 PROB1E7EW31 1015 aa20.16■□□□□ 0.82
HDAC11-204ENST00000404040 H0Y858 1186 aa20.16■□□□□ 0.82
HDAC11-204ENST00000404040 ADAMTS3O15072 1205 aa20.16■□□□□ 0.82
HDAC11-204ENST00000404040 CLASP2O75122 1294 aaKnown RBP20.16■□□□□ 0.82
HDAC11-204ENST00000404040 CD2BP2O95400 341 aaKnown RBP20.16■□□□□ 0.82
HDAC11-204ENST00000404040 BRD1O95696 1058 aa20.16■□□□□ 0.82
HDAC11-204ENST00000404040 TMOD1P28289 359 aa20.16■□□□□ 0.82
HDAC11-204ENST00000404040 REXO1Q8N1G1 1221 aaKnown RBP20.16■□□□□ 0.82
HDAC11-204ENST00000404040 NSUN7Q8NE18 718 aaKnown RBP20.16■□□□□ 0.82
HDAC11-204ENST00000404040 A0A0U1RQF3 1178 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 K7ELQ4 463 aaPredicted RBP20.15■□□□□ 0.82
HDAC11-204ENST00000404040 ZNF862O60290 1169 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 CTDNEP1O95476 244 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 OATP04181 439 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 DARSP14868 501 aaKnown RBP20.15■□□□□ 0.82
HDAC11-204ENST00000404040 GNA11P29992 359 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 MTHFRP42898 656 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 GPC3P51654 580 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 PRR16Q569H4 304 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 MCTP2Q6DN12 878 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 HELQQ8TDG4 1101 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 LENG9Q96B70 501 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 MRPL9Q9BYD2 267 aaKnown RBP20.15■□□□□ 0.82
HDAC11-204ENST00000404040 ZMYND12Q9H0C1 365 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 SAMM50Q9Y512 469 aa20.15■□□□□ 0.82
HDAC11-204ENST00000404040 WDR64B1ANS9 1081 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 EOMESO95936 686 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 PRKCEQ02156 737 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 GALNT17Q6IS24 598 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 TMEM105Q8N8V8 129 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 BICD2Q8TD16 824 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 ZNF668Q96K58 619 aaPredicted RBP20.14■□□□□ 0.81
HDAC11-204ENST00000404040 SCLT1Q96NL6 688 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 SMOC2Q9H3U7 446 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 DZANK1Q9NVP4 752 aa20.14■□□□□ 0.81
HDAC11-204ENST00000404040 WEE2P0C1S8 567 aa20.13■□□□□ 0.81
HDAC11-204ENST00000404040 CIITAP33076 1130 aa20.13■□□□□ 0.81
HDAC11-204ENST00000404040 BCAR1P56945 870 aa20.13■□□□□ 0.81
HDAC11-204ENST00000404040 ST3GAL1Q11201 340 aa20.13■□□□□ 0.81
HDAC11-204ENST00000404040 KIAA1841Q6NSI8 718 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms