RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SLC2A13Q96QE2 648 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 KCMF1Q9P0J7 381 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 NTMQ9P121 344 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 DPP7Q9UHL4 492 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 PRSS50Q9UI38 385 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 EID1Q9Y6B2 187 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 ZNF608Q9ULD9 1512 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 GRIN2BQ13224 1484 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 TDRD9Q8NDG6 1382 aaKnown RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 ADAMTS20P59510 1910 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 A0A0G2JNJ9 132 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 SH3D21A4FU49 640 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 AKAP10O43572 662 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 XPOTO43592 962 aaKnown RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 CFBP00751 764 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 CHGBP05060 677 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 CCND1P24385 295 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 MTNR1BP49286 362 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 SARSP49591 514 aaKnown RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 CDK17Q00537 523 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 ACAP2Q15057 778 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 LRRC41Q15345 812 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 GAREM2Q75VX8 874 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 PNMA8AQ86V59 439 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 CARFQ8N187 725 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 BHLHE22Q8NFJ8 381 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 YTHDC1Q96MU7 727 aaKnown RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 METTL14Q9HCE5 456 aaKnown RBP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 Q9UFV3 132 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 DNAI1Q9UI46 699 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 SPEF1Q9Y4P9 236 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 PCDHB6Q9Y5E3 794 aa6.61□□□□□ -1.35
HMGB3P19-201ENST00000403971 PRXQ9BXM0 1461 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 A0A0A6YYK5 440 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 NUAK1O60285 661 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 MAFO75444 373 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 PARNO95453 639 aaKnown RBP6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 C8AP07357 584 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 POLD1P28340 1107 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 EPHB1P54762 984 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 MAP3K12Q12852 859 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 PKN1Q16512 942 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 DGKDQ16760 1214 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 LARP4Q71RC2 724 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 BMP8AQ7Z5Y6 402 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 CDYL2Q8N8U2 506 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 TSPEARQ8WU66 669 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 GAB3Q8WWW8 586 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 JADE3Q92613 823 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 DYDC2Q96IM9 177 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 SOX7Q9BT81 388 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 SLC13A1Q9BZW2 595 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 EVLQ9UI08 416 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 PTPN22Q9Y2R2 807 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 LUC7L2Q9Y383 392 aaKnown RBP6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 GPR45Q9Y5Y3 372 aa6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 AQRO60306 1485 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 MAGI1Q96QZ7 1491 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P19-201ENST00000403971 CYP1A1P04798 512 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 AGXTP21549 392 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 MRPS9P82933 396 aaKnown RBP6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 CAP1Q01518 475 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 EIF4HQ15056 248 aaKnown RBP6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 MUM1Q2TAK8 710 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 GPR155Q7Z3F1 870 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 TXNDC5Q8NBS9 432 aaKnown RBP6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 OR14C36Q8NHC7 312 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 ADAMTS17Q8TE56 1095 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 AUTS2Q8WXX7 1259 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 RAX2Q96IS3 184 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 HIST1H2AHQ96KK5 128 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 HIST1H2AJQ99878 128 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 FDXACB1Q9BRP7 624 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 RTFDC1Q9BY42 306 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 HAPLN2Q9GZV7 340 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 POLR3BQ9NW08 1133 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 SAE1Q9UBE0 346 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 IP6K2Q9UHH9 426 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 FBXO10Q9UK96 956 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 CDY2AQ9Y6F7 541 aa6.59□□□□□ -1.35
HMGB3P19-201ENST00000403971 ADAMTS12P58397 1594 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 KLHL33A6NCF5 533 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 CUTAO60888 179 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 SNUPNO95149 360 aaKnown RBP6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 ZNF888P0CJ79 500 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 HNRNPLP14866 589 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 RRADP55042 308 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 PIN1Q13526 163 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 Q6ZUG5 572 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 ZNF761Q86XN6 746 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 FAM9AQ8IZU1 332 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 PPM1NQ8N819 430 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 LINC01356Q8N9X3 169 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 TEKT5Q96M29 485 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 KIAA1683Q9H0B3 1180 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 TMEM168Q9H0V1 697 aa6.58□□□□□ -1.36
HMGB3P19-201ENST00000403971 IFT122Q9HBG6 1241 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms