RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 NPLOC4Q8TAT6 608 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 TSKSQ9UJT2 592 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 UBIAD1Q9Y5Z9 338 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ZSWIM8A7E2V4 1837 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 IGLV3-22A0A075B6J6 115 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 RBAK-RBAKDNI3L0D1 243 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MEIS1O00470 390 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MOCS3O95396 460 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ITGB5P18084 799 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 HOXD10P28358 340 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 C2orf54Q08AI8 447 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ARHGEF6Q15052 776 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 NIPA1Q7RTP0 329 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 GLIS3Q8NEA6 775 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CYP2W1Q8TAV3 490 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 LENG9Q96B70 501 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 APBA2Q99767 749 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MXRA8Q9BRK3 442 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 FLT3LGP49771 235 aa17.42■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MARSP56192 900 aaKnown RBP17.42■□□□□ 0.38
CHRFAM7A-203ENST00000401522 KCNMA1Q12791 1236 aa17.42■□□□□ 0.38
CHRFAM7A-203ENST00000401522 LEKR1Q6ZMV7 388 aa17.42■□□□□ 0.38
CHRFAM7A-203ENST00000401522 INPP4AQ96PE3 977 aaPredicted RBP17.42■□□□□ 0.38
CHRFAM7A-203ENST00000401522 OSBPL9Q96SU4 736 aa17.42■□□□□ 0.38
CHRFAM7A-203ENST00000401522 LUC7LQ9NQ29 371 aaKnown RBP17.42■□□□□ 0.38
CHRFAM7A-203ENST00000401522 RPS6KA5O75582 802 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 IGHA2P01877 340 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SERPING1P05155 500 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 PLA2G4BP0C869 781 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CYP2B6P20813 491 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SLC9C1Q4G0N8 1177 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 PRR16Q569H4 304 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SFMBT2Q5VUG0 894 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 OLFML2BQ68BL8 750 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 GOLGA6L1Q8N7Z2 621 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ZFP91Q96JP5 570 aaPredicted RBP17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 NOX5Q96PH1 765 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 TINF2Q9BSI4 451 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 FAM184BQ9ULE4 1060 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 GABRQQ9UN88 632 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MAFGO15525 162 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 RGS20O76081 388 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SSBP05455 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CAPN2P17655 700 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 PRKCZQ05513 592 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 PPP4R3CPQ6ZMV5 832 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ARMCX2Q7L311 632 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ZC3H3Q8IXZ2 948 aaKnown RBP17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CRACR2AQ9BSW2 395 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 KCNMB3Q9NPA1 279 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SRRDQ9UH36 339 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 PCDHA2Q9Y5H9 948 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SYNGAP1Q96PV0 1343 aa17.41■□□□□ 0.38
CHRFAM7A-203ENST00000401522 A0A0U1RQG5 324 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 RNF40O75150 1001 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 IVLP07476 585 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SETQ01105 290 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 IRF5Q13568 498 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 GPBP1Q86WP2 473 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SLFN12Q8IYM2 578 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SPATA4Q8NEY3 305 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 AENQ8WTP8 325 aaKnown RBP17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 GPRASP2Q96D09 838 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SELENOOQ9BVL4 669 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 WDR11Q9BZH6 1224 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 KIAA1024Q9UPX6 916 aa17.4■□□□□ 0.38
CHRFAM7A-203ENST00000401522 FRMD3A2A2Y4 597 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TBX3O15119 743 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SYF2O95926 243 aaKnown RBP17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 PAFAH1B1P43034 410 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GFPT1Q06210 699 aaPredicted RBP17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 MTMR1Q13613 665 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TDRD12Q587J7 1177 aaKnown RBP17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CCDC181Q5TID7 509 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NLRX1Q86UT6 975 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 DRC1Q96MC2 740 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 LSM14BQ9BX40 385 aaKnown RBP17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KCNH7Q9NS40 1196 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 FLRT1Q9NZU1 646 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 RNF14Q9UBS8 474 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 LRRC37A2A6NM11 1700 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 E9PMD0 336 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ZMYND10O75800 440 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 NOL4O94818 638 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 PRMT2P55345 433 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 EDRF1Q3B7T1 1238 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 HERC4Q5GLZ8 1057 aaPredicted RBP17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 ETNPPLQ8TBG4 499 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 KCTD10Q9H3F6 313 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 FAM204AQ9H8W3 233 aa17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.39■□□□□ 0.37
CHRFAM7A-203ENST00000401522 SPATA31C2B4DYI2 1134 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 TULP2O00295 520 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 MSH4O15457 936 aa17.38■□□□□ 0.37
CHRFAM7A-203ENST00000401522 PHACTR2O75167 634 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms