RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 RBAK-RBAKDNI3L0D1 243 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 PJA2O43164 708 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 PPP1R37O75864 691 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 KLRC1P26715 233 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 PEX3P56589 373 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 FAM102BQ5T8I3 360 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 IQCEQ6IPM2 695 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 USP50Q70EL3 339 aaPredicted RBP12.83□□□□□ -0.36
COL25A1-202ENST00000399127 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 CBWD1Q9BRT8 395 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 KIFC3Q9BVG8 833 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
COL25A1-202ENST00000399127 CSADQ9Y600 493 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 RLFQ13129 1914 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 WDR64B1ANS9 1081 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 SLC16A4O15374 487 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 FMO5P49326 533 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 DLG4P78352 724 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 SATB1Q01826 763 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.36
COL25A1-202ENST00000399127 NLRX1Q86UT6 975 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 VSIG10LQ86VR7 867 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 MSANTD4Q8NCY6 345 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 NOX5Q96PH1 765 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
COL25A1-202ENST00000399127 SNX12Q9UMY4 172 aa12.83□□□□□ -0.36
COL25A1-202ENST00000399127 PHIPQ8WWQ0 1821 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 DOCK5Q9H7D0 1870 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 CCDC151A5D8V7 595 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 ZMYND10O75800 440 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 RGS20O76081 388 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 GFPT2O94808 682 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 CCND2P30279 289 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 NF2P35240 595 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 PLA2G4AP47712 749 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 PSMC5P62195 406 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 MRPS25P82663 173 aaKnown RBP12.82□□□□□ -0.36
COL25A1-202ENST00000399127 C2orf54Q08AI8 447 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 ANO5Q75V66 913 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 CEP120Q8N960 986 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
COL25A1-202ENST00000399127 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
COL25A1-202ENST00000399127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL25A1-202ENST00000399127 DMAC2Q9NW81 257 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 UBE4BO95155 1302 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 C19orf81C9J6K1 198 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 LRRN2O75325 713 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 FTCDO95954 541 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 PLS3P13797 630 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 MATR3P43243 847 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL25A1-202ENST00000399127 IREB2P48200 963 aaKnown RBP12.82□□□□□ -0.36
COL25A1-202ENST00000399127 PTPROQ16827 1216 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 HAUS6Q7Z4H7 955 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 OSBPL9Q96SU4 736 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 ABCB6Q9NP58 842 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 LCMT1Q9UIC8 334 aa12.82□□□□□ -0.36
COL25A1-202ENST00000399127 PACSIN2Q9UNF0 486 aaPredicted RBP12.82□□□□□ -0.36
COL25A1-202ENST00000399127 CCDC169A6NNP5 214 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 PALMO75781 387 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 KRT76Q01546 638 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 NOL9Q5SY16 702 aaKnown RBP12.81□□□□□ -0.36
COL25A1-202ENST00000399127 CATSPERGQ6ZRH7 1159 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 FAM43BQ6ZT52 329 aaPredicted RBP12.81□□□□□ -0.36
COL25A1-202ENST00000399127 CREG2Q8IUH2 290 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
COL25A1-202ENST00000399127 TLR10Q9BXR5 811 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 TEX13BQ9BXU2 312 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 GOLPH3Q9H4A6 298 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 TAF1DQ9H5J8 278 aaPredicted RBP12.81□□□□□ -0.36
COL25A1-202ENST00000399127 CYP39A1Q9NYL5 469 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 GABBR1Q9UBS5 961 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 LOXHD1Q8IVV2 1947 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 KIAA1217Q5T5P2 1943 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 GOLGA8IPA6NC78 632 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 GOLGA8JA6NMD2 632 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
COL25A1-202ENST00000399127 FDX1P10109 184 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 JAK3P52333 1124 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 JAM2P57087 298 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 BFSP1Q12934 665 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 BRD3Q15059 726 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 NFIL3Q16649 462 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 TREML2Q5T2D2 321 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 C4orf19Q8IY42 314 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 CLMNQ96JQ2 1002 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 C12orf42Q96LP6 360 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 MKNK1Q9BUB5 465 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 MOV10L1Q9BXT6 1211 aaKnown RBP12.81□□□□□ -0.36
COL25A1-202ENST00000399127 FUT8Q9BYC5 575 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 LUC7LQ9NQ29 371 aaKnown RBP12.81□□□□□ -0.36
COL25A1-202ENST00000399127 RAB21Q9UL25 225 aa12.81□□□□□ -0.36
COL25A1-202ENST00000399127 ZNF862O60290 1169 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms