RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 AJAP1Q9UKB5 411 aaPredicted RBP10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 AMFRQ9UKV5 643 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 PPP1R9AQ9ULJ8 1098 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 MINPP1Q9UNW1 487 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 RBAK-RBAKDNI3L0D1 243 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 CTHP32929 405 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 GJA5P36382 358 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 ARHGAP44Q17R89 818 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 NUGGCQ68CJ6 796 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 ADGRD1Q6QNK2 874 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 HOOK3Q86VS8 718 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 ERICH1Q86X53 443 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 NEK9Q8TD19 979 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 NUCKS1Q9H1E3 243 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 RIC8AQ9NPQ8 531 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 ATP8A2Q9NTI2 1148 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 TBK1Q9UHD2 729 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 GGA2Q9UJY4 613 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 TCP11X1B4DZS4 312 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 FLOT1O75955 427 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 ACSL3O95573 720 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 MYBP10242 640 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 HIBADHP31937 336 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 KCNJ1P48048 391 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 CASP5P51878 434 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 GALCP54803 685 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 TNIP1Q15025 636 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 IFI16Q16666 785 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 TLDC1Q6P9B6 456 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 SEPT14Q6ZU15 432 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 IRF2BP2Q7Z5L9 587 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 TRIM59Q8IWR1 403 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 ACTRT1Q8TDG2 376 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 C18orf8Q96DM3 657 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 RAB34Q9BZG1 259 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 ARMCX3Q9UH62 379 aaPredicted RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 C15orf41Q9Y2V0 281 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 KCPQ6ZWJ8 1503 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 PPP1R12AO14974 1030 aaPredicted RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 DNAJC8O75937 253 aaPredicted RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 HSPA1LP34931 641 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 CASP4P49662 377 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 SARNPP82979 210 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 RNASELQ05823 741 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 LONRF1Q17RB8 773 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 TMCO4Q5TGY1 634 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 BZW1Q7L1Q6 419 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 RETREG3Q86VR2 466 aa10.69□□□□□ -0.7
PTCHD4-202ENST00000398738 FGRP09769 529 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 SLC16A2P36021 539 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 PABPC4Q13310 644 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 LACTB2Q53H82 288 aaPredicted RBP10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 CAPRIN2Q6IMN6 1127 aaKnown RBP10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 VPS36Q86VN1 386 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 SLF2Q8IX21 1173 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 LRRC57Q8N9N7 239 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 SCFD1Q8WVM8 642 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 EYA3Q99504 573 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 FAM114A2Q9NRY5 505 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 KCNG1Q9UIX4 513 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 PCDHA12Q9UN75 941 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 PHRF1Q9P1Y6 1649 aaKnown RBP10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 C5orf60A6NFR6 353 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 LRRN2O75325 713 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 KRT16P08779 473 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 VPS41P49754 854 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 GRIK5Q16478 980 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 C12orf60Q5U649 245 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 CCDC65Q8IXS2 484 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 SLC35G2Q8TBE7 412 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 ZNF317Q96PQ6 595 aaPredicted RBP10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 CNOT10Q9H9A5 744 aaKnown RBP10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 ARHGEF10LQ9HCE6 1279 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 NOP53Q9NZM5 478 aaKnown RBP10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 STK17AQ9UEE5 414 aa10.68□□□□□ -0.7
PTCHD4-202ENST00000398738 DDX60Q8IY21 1712 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 H0Y3Z8 333 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 CCDC188H7C350 402 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 PDHA1P08559 390 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 PCP11498 1178 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 XRCC5P13010 732 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 POTEGQ6S5H5 508 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 FAM47EQ6ZV65 393 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 ARMC9Q7Z3E5 817 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 NT5DC3Q86UY8 548 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 DNAJC19Q96DA6 116 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 ZNF570Q96NI8 536 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 CARD10Q9BWT7 1032 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 EDEM3Q9BZQ6 932 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 GANQ9H2C0 597 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 AIPL1Q9NZN9 384 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 GCNT4Q9P109 453 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 CCDC169A6NNP5 214 aa10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 MPHOSPH10O00566 681 aaKnown RBP10.67□□□□□ -0.7
PTCHD4-202ENST00000398738 DDX3XO00571 662 aaKnown RBP eCLIP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms