RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 DHX58Q96C10 678 aa11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 INO80BQ9C086 356 aaPredicted RBP11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 PRO3102Q9H379 93 aa11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 SLC4A7Q9Y6M7 1214 aa11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 MYH11P35749 1972 aa11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 IGKV6-21A0A0C4DH24 114 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 CSPG5O95196 566 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 LYPLA2O95372 231 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 PLA2G4BP0C869 781 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 KCNJ6P48051 423 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 NUCB2P80303 420 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 IKBKEQ14164 716 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 PLEKHG4Q58EX7 1191 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 HABP4Q5JVS0 413 aaKnown RBP11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 FAM228AQ86W67 206 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 LINC01465Q8N7H1 131 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 BSNDQ8WZ55 320 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 CERS4Q9HA82 394 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 MTUS1Q9ULD2 1270 aa11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 CIZ1Q9ULV3 898 aaPredicted RBP11.21□□□□□ -0.62
THUMPD1-202ENST00000396083 YEATS4O95619 227 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 KRT18P05783 430 aaKnown RBP11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 GLRA2P23416 452 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 CASP1P29466 404 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 TXLNAP40222 546 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 RBL2Q08999 1139 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 CAPSQ13938 189 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 RRAGBQ5VZM2 374 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 RINT1Q6NUQ1 792 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 TSHZ1Q6ZSZ6 1077 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 SPRED2Q7Z698 418 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 SEPT8Q92599 483 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 AK8Q96MA6 479 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 ZBED2Q9BTP6 218 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 ADAMTS10Q9H324 1103 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 BLOC1S4Q9NUP1 217 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 MICAL3Q7RTP6 2002 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 CCDC169A6NNP5 214 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 MGEA5O60502 916 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 EYA4O95677 639 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 ACTN1P12814 892 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 ATP2A2P16615 1042 aaKnown RBP11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 RFC5P40937 340 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 STAT6P42226 847 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 WDR5P61964 334 aaKnown RBP11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 AXDND1Q5T1B0 1012 aaPredicted RBP11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 Q7L0L9 218 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 GPBP1Q86WP2 473 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 NME8Q8N427 588 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 KCNG4Q8TDN1 519 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
THUMPD1-202ENST00000396083 DENND3A2RUS2 1198 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 HIP1RO75146 1068 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 PTMSP20962 102 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 CRYBB1P53674 252 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 PEX3P56589 373 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 CCDC173Q0VFZ6 552 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 CNKSR3Q6P9H4 555 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 CATSPER4Q7RTX7 472 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 LARP4BQ92615 738 aaKnown RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 ADAM2Q99965 735 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 TMX1Q9H3N1 280 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 DBR1Q9UK59 544 aaKnown RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 PIN4Q9Y237 131 aaKnown RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 MUC3AQ02505 3323 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 B4GALT5O43286 388 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 CXCL10P02778 98 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 PDIA4P13667 645 aaKnown RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 DARSP14868 501 aaKnown RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 CYP11B2P19099 503 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 BMP8BP34820 402 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 NAALADL2Q58DX5 795 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 RTN4RL1Q86UN2 441 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 GRAMD1CQ8IYS0 662 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 CPB2Q96IY4 423 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 JPH2Q9BR39 696 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 GCOM2Q9BZD3 368 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 RNF19AQ9NV58 838 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 TBC1D7Q9P0N9 293 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
THUMPD1-202ENST00000396083 TTLL13PA6NNM8 815 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 PPP6R2O75170 966 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 IDEP14735 1019 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 SLC12A3P55017 1021 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 TMEM119Q4V9L6 283 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 FAM26DQ5JW98 314 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 RPAINQ86UA6 219 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 ZSCAN30Q86W11 494 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 LINC01599Q8WXQ3 324 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 PPP1R9BQ96SB3 815 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 CCSER1Q9C0I3 900 aa11.18□□□□□ -0.62
THUMPD1-202ENST00000396083 RCOR1Q9UKL0 485 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms