RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 TRIM49CP0CI26 452 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 RNF208Q9H0X6 261 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 GPRC5CQ9NQ84 441 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 MEIS2O14770 477 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 KLRC1P26715 233 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 CCDC113Q9H0I3 377 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 EPN1Q9Y6I3 576 aaPredicted RBP20.96■□□□□ 0.95
CXXC4-201ENST00000394767 ACTN4O43707 911 aaKnown RBP20.96■□□□□ 0.95
CXXC4-201ENST00000394767 ELF1P32519 619 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 ZNF484Q5JVG2 852 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 ANKRD40Q6AI12 368 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 VSIG10LQ86VR7 867 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 STIM2Q9P246 746 aa20.96■□□□□ 0.95
CXXC4-201ENST00000394767 FKTNO75072 461 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 TOMM70O94826 608 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 RSRC2Q7L4I2 434 aaKnown RBP20.95■□□□□ 0.94
CXXC4-201ENST00000394767 CEP57Q86XR8 500 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 KIFC3Q9BVG8 833 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 COL1A1P02452 1464 aaPredicted RBP20.95■□□□□ 0.94
CXXC4-201ENST00000394767 UPP2O95045 317 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 PRAMEF19Q5SWL8 479 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 NAPGQ99747 312 aaPredicted RBP20.95■□□□□ 0.94
CXXC4-201ENST00000394767 RUSC1Q9BVN2 902 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 HUS1O60921 280 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 RHOBTB3O94955 611 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 HIRAP54198 1017 aaPredicted RBP20.95■□□□□ 0.94
CXXC4-201ENST00000394767 MAP2K5Q13163 448 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 SYCE1Q8N0S2 351 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 SYNJ2BP-COX16A0A087WUM0 186 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 SLC26A2P50443 739 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 LMBRD2Q68DH5 695 aaPredicted RBP20.95■□□□□ 0.94
CXXC4-201ENST00000394767 C17orf53Q8N3J3 647 aaPredicted RBP20.95■□□□□ 0.94
CXXC4-201ENST00000394767 COX16Q9P0S2 106 aa20.95■□□□□ 0.94
CXXC4-201ENST00000394767 KCNJ6P48051 423 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 KSR1Q8IVT5 923 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 CEP112Q8N8E3 955 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 CGNQ9P2M7 1197 aaKnown RBP20.94■□□□□ 0.94
CXXC4-201ENST00000394767 NRBP1Q9UHY1 535 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 PLA2G6O60733 806 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 RBM10P98175 930 aaKnown RBP20.94■□□□□ 0.94
CXXC4-201ENST00000394767 TRIM50Q86XT4 487 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 ITGB4P16144 1822 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 DCDC2CA8MYV0 355 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 DUOXA2Q1HG44 320 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 FAM110CQ1W6H9 321 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 FAM117BQ6P1L5 589 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 NIPA1Q7RTP0 329 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 LRRC4Q9HBW1 653 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 PRMT7Q9NVM4 692 aaPredicted RBP20.94■□□□□ 0.94
CXXC4-201ENST00000394767 HSPBP1Q9NZL4 362 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 PTPROQ16827 1216 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 IQSEC1Q6DN90 963 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 LBX2Q6XYB7 198 aa20.94■□□□□ 0.94
CXXC4-201ENST00000394767 IGSF9BQ9UPX0 1349 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 GAS2O43903 313 aaKnown RBP20.93■□□□□ 0.94
CXXC4-201ENST00000394767 RPS6KA1Q15418 735 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 PPP1R7Q15435 360 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 DAAM2Q86T65 1068 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 ATRNL1Q5VV63 1379 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 PEX10O60683 326 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 TARS2Q9BW92 718 aaKnown RBP20.93■□□□□ 0.94
CXXC4-201ENST00000394767 MTIF3Q9H2K0 278 aaKnown RBP20.93■□□□□ 0.94
CXXC4-201ENST00000394767 TSKSQ9UJT2 592 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 DNAJC12Q9UKB3 198 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 LAMB4A4D0S4 1761 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 MED7O43513 233 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 CEP104O60308 925 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 SNHG28P0DPA3 235 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 KRT39Q6A163 491 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 CDR2LQ86X02 465 aaPredicted RBP20.93■□□□□ 0.94
CXXC4-201ENST00000394767 ZBED6P86452 979 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 ATF7IP2Q5U623 682 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 PRPF31Q8WWY3 499 aaKnown RBP20.93■□□□□ 0.94
CXXC4-201ENST00000394767 NAP1L3Q99457 506 aaPredicted RBP20.93■□□□□ 0.94
CXXC4-201ENST00000394767 SETD4Q9NVD3 440 aa20.93■□□□□ 0.94
CXXC4-201ENST00000394767 BUB1O43683 1085 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 C4orf19Q8IY42 314 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 KPNA6O60684 536 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 KYAT1Q16773 422 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 RSPH10B2B2RC85 870 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 GOLGA8SH3BPF8 625 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 SOCS7O14512 581 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 RSPH10BP0C881 870 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 PPM1FP49593 454 aaPredicted RBP20.92■□□□□ 0.94
CXXC4-201ENST00000394767 KIZQ2M2Z5 673 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 OTOP1Q7RTM1 612 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 LRRC8AQ8IWT6 810 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 RIPK3Q9Y572 518 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 NUP98P52948 1817 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 INSRRP14616 1297 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 ADSSL1Q8N142 457 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 THEM5Q8N1Q8 247 aa20.92■□□□□ 0.94
CXXC4-201ENST00000394767 LGALS16A8MUM7 142 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 RNF8O76064 485 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 EMSYQ7Z589 1322 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 FLT3LGP49771 235 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 SND1Q7KZF4 910 aaKnown RBP eCLIP20.91■□□□□ 0.94
CXXC4-201ENST00000394767 AMFRQ9UKV5 643 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 PIK3CDO00329 1044 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 PPFIA4O75335 1185 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms