RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CHMP2AO43633 222 aa19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 ZXDAP98168 799 aa19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 NPY5RQ15761 445 aa19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 ANKRD54Q6NXT1 300 aa19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 CPLX2Q6PUV4 134 aaKnown RBP19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 SLC39A11Q8N1S5 342 aa19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 MRPL43Q8N983 215 aaKnown RBP19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 FBXL18Q96ME1 805 aa19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 SCLT1Q96NL6 688 aa19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 JPH2Q9BR39 696 aaPredicted RBP19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 ENTPD7Q9NQZ7 604 aa19.67■□□□□ 0.74
SNRPA1-202ENST00000394082 MAFO75444 373 aaPredicted RBP19.66■□□□□ 0.74
SNRPA1-202ENST00000394082 SFPQP23246 707 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNRPA1-202ENST00000394082 NHLH1Q02575 133 aa19.66■□□□□ 0.74
SNRPA1-202ENST00000394082 PLPP4Q5VZY2 271 aa19.66■□□□□ 0.74
SNRPA1-202ENST00000394082 PRRX2Q99811 253 aa19.66■□□□□ 0.74
SNRPA1-202ENST00000394082 SEPT9Q9UHD8 586 aaPredicted RBP19.66■□□□□ 0.74
SNRPA1-202ENST00000394082 PPME1Q9Y570 386 aa19.66■□□□□ 0.74
SNRPA1-202ENST00000394082 HIDE1A8MVS5 230 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 ZNF623O75123 536 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 TDP2O95551 362 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 TECP42680 631 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 PHKA2P46019 1235 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 ALDH7A1P49419 539 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 PSMC5P62195 406 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 RBM10P98175 930 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 DRP2Q13474 957 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 SMC1AQ14683 1233 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 BMS1Q14692 1282 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 NONOQ15233 471 aaKnown RBP eCLIP19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 MTERF2Q49AM1 385 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 SYCE2Q6PIF2 218 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 KRT25Q7Z3Z0 450 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 TMC7Q7Z402 723 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 EXOC8Q8IYI6 725 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 CASP10Q92851 521 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 FAM20AQ96MK3 541 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 IRAK3Q9Y616 596 aa19.65■□□□□ 0.74
SNRPA1-202ENST00000394082 TMEM221A6NGB7 291 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 M0R296 226 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 DKC1O60832 514 aaKnown RBP eCLIP19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 RAB27AP51159 221 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 ITIH3Q06033 890 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 SIGLEC14Q08ET2 396 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 PPP2R5CQ13362 524 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 TPRNQ4KMQ1 711 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 PPP4R3AQ6IN85 833 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 GJA10Q969M2 543 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 DDX25Q9UHL0 483 aaKnown RBP19.64■□□□□ 0.73
SNRPA1-202ENST00000394082 A0A087WZ62 844 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 C2orf71A6NGG8 1288 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 GCFC2P16383 781 aaKnown RBP19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 POLGP54098 1239 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 BCAR1P56945 870 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 GIT2Q14161 759 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 ANO5Q75V66 913 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 RNF169Q8NCN4 708 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 HELQQ8TDG4 1101 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 PBXIP1Q96AQ6 731 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 ZNF668Q96K58 619 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 NECTIN4Q96NY8 510 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 FDXACB1Q9BRP7 624 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 KCNMB3Q9NPA1 279 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 SUCLA2Q9P2R7 463 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 STK39Q9UEW8 545 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 HCFC2Q9Y5Z7 792 aa19.63■□□□□ 0.73
SNRPA1-202ENST00000394082 TBX3O15119 743 aa19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 CDKL5O76039 1030 aa19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 FGFR4P22455 802 aa19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 PBX3P40426 434 aa19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 QARSP47897 775 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 ALYREFQ86V81 257 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 TMEM169Q96HH4 297 aa19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 NAP1L4Q99733 375 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 ADAM7Q9H2U9 754 aa19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 NR2E1Q9Y466 385 aa19.62■□□□□ 0.73
SNRPA1-202ENST00000394082 STK36Q9NRP7 1315 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 DDX11L8A8MPP1 907 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 CSDE1O75534 798 aaKnown RBP19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 PTPN21Q16825 1174 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 TWF2Q6IBS0 349 aaKnown RBP19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 CES5AQ6NT32 575 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 GLB1LQ6UWU2 654 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 RHPN2Q8IUC4 686 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 FBXL6Q8N531 539 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 SLC7A3Q8WY07 619 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 PHF20Q9BVI0 1012 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 IFT122Q9HBG6 1241 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 CYP26B1Q9NR63 512 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 FAM105AQ9NUU6 356 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 VAV3Q9UKW4 847 aa19.61■□□□□ 0.73
SNRPA1-202ENST00000394082 TMEM150BA6NC51 233 aa19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 GAS2O43903 313 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 CLASP2O75122 1294 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 P4HBP07237 508 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 XBP1P17861 261 aa19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 MRE11P49959 708 aa19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 INF2Q27J81 1249 aa19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 NEK8Q86SG6 692 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms