RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 DPP7Q9UHL4 492 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 HIP1RO75146 1068 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 PAK2Q13177 524 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 Q3C1V9 767 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 CYFIP1Q7L576 1253 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 RIOX2Q8IUF8 465 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 MSL3Q8N5Y2 521 aaKnown RBP8.75□□□□□ -1.01
ATXN3-203ENST00000393287 GSDMBQ8TAX9 411 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 GMLQ99445 158 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 RBSNQ9H1K0 784 aa8.75□□□□□ -1.01
ATXN3-203ENST00000393287 FKTNO75072 461 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 SPRYD7Q5W111 196 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 DNAJC24Q6P3W2 148 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 HEXIM2Q96MH2 286 aaKnown RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 PANX2Q96RD6 677 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 MTG1Q9BT17 334 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 SPATC1LQ9H0A9 340 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 ASCC2Q9H1I8 757 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 IGSF9BQ9UPX0 1349 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 POTEMA6NI47 508 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 H7C4K7 107 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 C6orf222P0C671 652 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 MAPTP10636 758 aaKnown RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 GABPAQ06546 454 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 PCBP1Q15365 356 aaKnown RBP eCLIP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 KRT39Q6A163 491 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 NLRC4Q9NPP4 1024 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 BCCIPQ9P287 314 aaKnown RBP eCLIP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 AKR1A1P14550 325 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 SV2CQ496J9 727 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 ZNF449Q6P9G9 518 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 RSRC2Q7L4I2 434 aaKnown RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 TTC1Q99614 292 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 TMX1Q9H3N1 280 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 NDST4Q9H3R1 872 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 SLC38A10Q9HBR0 1119 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 PXMP2Q9NR77 195 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 FANCLQ9NW38 375 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 RPS6KA5O75582 802 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 VAMP7P51809 220 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 SP3Q02447 781 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 NOTUMQ6P988 496 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 CLEC17AQ6ZS10 378 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 DCP1BQ8IZD4 617 aaKnown RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 OXER1Q8TDS5 423 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 RANBP17Q9H2T7 1088 aaKnown RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 FBXO28Q9NVF7 368 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 MYO1FO00160 1098 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 TDP2O95551 362 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 RPA1P27694 616 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 AXLP30530 894 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 TATDN1Q6P1N9 297 aa8.74□□□□□ -1.01
ATXN3-203ENST00000393287 UBE2TQ9NPD8 197 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-203ENST00000393287 POTECB2RU33 542 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 PSMC4P43686 418 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 LONRF2Q1L5Z9 754 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 ERCC6LQ2NKX8 1250 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 IQSEC1Q6DN90 963 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 TSC1Q92574 1164 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 PCIF1Q9H4Z3 704 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 CPSF3Q9UKF6 684 aaKnown RBP8.73□□□□□ -1.01
ATXN3-203ENST00000393287 AGO2Q9UKV8 859 aaKnown RBP8.73□□□□□ -1.01
ATXN3-203ENST00000393287 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-203ENST00000393287 E9PMD0 336 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 SLC16A4O15374 487 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 GFPT2O94808 682 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 RALAP11233 206 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 RBP5P82980 135 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 PRKCEQ02156 737 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 NFX1Q12986 1120 aaKnown RBP8.73□□□□□ -1.01
ATXN3-203ENST00000393287 C6orf163Q5TEZ5 329 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 EPSTI1Q96J88 318 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 MKNK1Q9BUB5 465 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 DBR1Q9UK59 544 aaKnown RBP8.73□□□□□ -1.01
ATXN3-203ENST00000393287 PCDHB7Q9Y5E2 793 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 ITGA4P13612 1032 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 DUOXA2Q1HG44 320 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 TTC16Q8NEE8 873 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 PBKQ96KB5 322 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 FBXO2Q9UK22 296 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-203ENST00000393287 DPYSL4O14531 572 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 KCNA3P22001 575 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 CATSPERGQ6ZRH7 1159 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 ARHGAP18Q8N392 663 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 PIGOQ8TEQ8 1089 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 AGBL1Q96MI9 1066 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 TMEM63CQ9P1W3 806 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 VWA5AO00534 786 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 CLIC2O15247 247 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 VIMP08670 466 aaKnown RBP8.73□□□□□ -1.01
ATXN3-203ENST00000393287 HAUS6Q7Z4H7 955 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 EFHBQ8N7U6 833 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 TMEM35BQ8NCS4 154 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 OR6B3Q8NGW1 331 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 SEPT8Q92599 483 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 ASNSD1Q9NWL6 643 aa8.73□□□□□ -1.01
ATXN3-203ENST00000393287 CEP104O60308 925 aa8.72□□□□□ -1.01
ATXN3-203ENST00000393287 APLP1P51693 650 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms