RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 PAFAH1B1P43034 410 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 NAP1L1P55209 391 aaKnown RBP15.58■□□□□ 0.08
MKS1-203ENST00000393120 SMC1AQ14683 1233 aaKnown RBP15.58■□□□□ 0.08
MKS1-203ENST00000393120 TMEM132BQ14DG7 1078 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 SUPT20HL1Q3ZLR7 823 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 SH3D19Q5HYK7 790 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 MEI1Q5TIA1 1274 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 CCDC70Q6NSX1 233 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 NFRKBQ6P4R8 1299 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 SPATA4Q8NEY3 305 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 NTPCRQ9BSD7 190 aaKnown RBP15.58■□□□□ 0.08
MKS1-203ENST00000393120 INTS2Q9H0H0 1204 aaKnown RBP15.58■□□□□ 0.08
MKS1-203ENST00000393120 C17orf75Q9HAS0 396 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 TMOD4Q9NZQ9 345 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 DNAJC12Q9UKB3 198 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 USP20Q9Y2K6 914 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 AFG3L2Q9Y4W6 797 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 NFASCO94856 1347 aa15.58■□□□□ 0.08
MKS1-203ENST00000393120 A0A0A6YYK5 440 aaPredicted RBP15.57■□□□□ 0.08
MKS1-203ENST00000393120 MYL7Q01449 175 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 DMTNQ08495 405 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 TERF2Q15554 542 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 ENOX2Q16206 610 aaKnown RBP15.57■□□□□ 0.08
MKS1-203ENST00000393120 MAP9Q49MG5 647 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 XKR9Q5GH70 373 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 MAEAQ7L5Y9 396 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 OTUD6AQ7L8S5 288 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 GPC2Q8N158 579 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 XXYLT1Q8NBI6 393 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 SLC30A5Q8TAD4 765 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 LMO3Q8TAP4 145 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 TRPM4Q8TD43 1214 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 PACSIN1Q9BY11 444 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 APEX2Q9UBZ4 518 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 RLFQ13129 1914 aa15.57■□□□□ 0.08
MKS1-203ENST00000393120 CES2O00748 559 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 KCNA2P16389 499 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 VAMP7P51809 220 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 PRAMEF18Q5VWM3 479 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 GJB7Q6PEY0 223 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 ANO5Q75V66 913 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 SPIRE2Q8WWL2 714 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 ATP6V0A1Q93050 837 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 SYT11Q9BT88 431 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 ACAD9Q9H845 621 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 CYP39A1Q9NYL5 469 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 EXOC7Q9UPT5 735 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 GRID2IPA4D2P6 1211 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 DDX3XO00571 662 aaKnown RBP eCLIP15.56■□□□□ 0.086e-6■□□□□ 8.9
MKS1-203ENST00000393120 NCK2O43639 380 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 EVI5O60447 810 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 RGS20O76081 388 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 STBD1O95210 358 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 TRIM49P0CI25 452 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 TRIM49CP0CI26 452 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 LMNB1P20700 586 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 SMTNP53814 917 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 NPEPPSP55786 919 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 CETN1Q12798 172 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 PLS1Q14651 629 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 DRAP1Q14919 205 aaPredicted RBP15.56■□□□□ 0.08
MKS1-203ENST00000393120 CFAP221Q4G0U5 840 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 OLIG1Q8TAK6 271 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 GPR88Q9GZN0 384 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 GGA3Q9NZ52 723 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 HSPBP1Q9NZL4 362 aa15.56■□□□□ 0.08
MKS1-203ENST00000393120 SPATA31C2B4DYI2 1134 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 H2AFZP0C0S5 128 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 PEX3P56589 373 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 RTP1P59025 263 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 C2orf54Q08AI8 447 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 GLE1Q53GS7 698 aaKnown RBP15.55■□□□□ 0.08
MKS1-203ENST00000393120 CCDC181Q5TID7 509 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 CCNI2Q6ZMN8 369 aaPredicted RBP15.55■□□□□ 0.08
MKS1-203ENST00000393120 H2AFVQ71UI9 128 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.55■□□□□ 0.08
MKS1-203ENST00000393120 KIFAP3Q92845 792 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 VIPAS39Q9H9C1 493 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 PRDM10Q9NQV6 1147 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 TBX20Q9UMR3 447 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 PHIPQ8WWQ0 1821 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 SLC16A4O15374 487 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 EIF3JO75822 258 aaKnown RBP15.55■□□□□ 0.08
MKS1-203ENST00000393120 PSAPP07602 524 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 HIRAP54198 1017 aaPredicted RBP15.55■□□□□ 0.08
MKS1-203ENST00000393120 GPS2Q13227 327 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 CASP8Q14790 479 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 R3HDM1Q15032 1099 aaKnown RBP15.55■□□□□ 0.08
MKS1-203ENST00000393120 LRRC57Q8N9N7 239 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 TMEM161BQ8NDZ6 487 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 CBWD1Q9BRT8 395 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 A1CFQ9NQ94 594 aaKnown RBP15.55■□□□□ 0.08
MKS1-203ENST00000393120 PDLIM7Q9NR12 457 aa15.55■□□□□ 0.08
MKS1-203ENST00000393120 SSC5DA1L4H1 1573 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 TMEM150BA6NC51 233 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 SPDYE16A6NNV3 312 aaPredicted RBP15.54■□□□□ 0.08
MKS1-203ENST00000393120 CXCR5P32302 372 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 NPTX2P47972 431 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 ENPEPQ07075 957 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms