RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PAGR1Q9BTK6 254 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 RAB17Q9H0T7 212 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 HGSO14964 777 aaPredicted RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 ZNF263O14978 683 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 KRT14P02533 472 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 P4HBP07237 508 aaKnown RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 PAX7P23759 505 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 FMO5P49326 533 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 NAB2Q15742 525 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 DDX42Q86XP3 938 aaKnown RBP eCLIP11.38□□□□□ -0.59
CALD1-203ENST00000393118 ANKRD35Q8N283 1001 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 XXYLT1Q8NBI6 393 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 FAM151AQ8WW52 585 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 MRRFQ96E11 262 aaKnown RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 NT5C1BQ96P26 610 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 PSD3Q9NYI0 1048 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 RAB21Q9UL25 225 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 SLIT2O94813 1529 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 A0A1W2PRG0 241 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 ZBTB7AO95365 584 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 SNHG28P0DPA3 235 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 POLGP54098 1239 aaPredicted RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 DEPTORQ8TB45 409 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 TUFT1Q9NNX1 390 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
CALD1-203ENST00000393118 NOC2LQ9Y3T9 749 aaKnown RBP11.38□□□□□ -0.59
CALD1-203ENST00000393118 SOX5P35711 763 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 VAMP7P51809 220 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 NPEPPSP55786 919 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
CALD1-203ENST00000393118 CDK17Q00537 523 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
CALD1-203ENST00000393118 SNX1Q13596 522 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 PLA2G4FQ68DD2 849 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 WDR93Q6P2C0 686 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 ZNF571Q7Z3V5 609 aaPredicted RBP11.37□□□□□ -0.59
CALD1-203ENST00000393118 HAUS6Q7Z4H7 955 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 SPDL1Q96EA4 605 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 GMCL1Q96IK5 515 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 UNC45AQ9H3U1 944 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 KCNK9Q9NPC2 374 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 C1orf112Q9NSG2 853 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 SNED1Q8TER0 1413 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 SLC12A3P55017 1021 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 SEPT14Q6ZU15 432 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 INTS8Q75QN2 995 aaKnown RBP11.37□□□□□ -0.59
CALD1-203ENST00000393118 DNAJC18Q9H819 358 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 KCNH7Q9NS40 1196 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 MYH6P13533 1939 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 FTLP02792 175 aaPredicted RBP11.37□□□□□ -0.59
CALD1-203ENST00000393118 BAG6P46379 1132 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 PSEN1P49768 467 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 AMPD2Q01433 879 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 ZKSCAN8Q15776 578 aaPredicted RBP11.37□□□□□ -0.59
CALD1-203ENST00000393118 TLR10Q9BXR5 811 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 YIPF3Q9GZM5 350 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 GPRC5CQ9NQ84 441 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 PLAAQ9Y263 795 aa11.37□□□□□ -0.59
CALD1-203ENST00000393118 MYO3BQ8WXR4 1341 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 SART1O43290 800 aaKnown RBP11.36□□□□□ -0.59
CALD1-203ENST00000393118 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 MTMR2Q13614 643 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 GNPTABQ3T906 1256 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 RPUSD2Q8IZ73 545 aaKnown RBP11.36□□□□□ -0.59
CALD1-203ENST00000393118 GLG1Q92896 1179 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 KIFC3Q9BVG8 833 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 DENND3A2RUS2 1198 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 NFIBO00712 420 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 RAD51CO43502 376 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 CLTAP09496 248 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 COPB2P35606 906 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 MFAP3P55082 362 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 DENND2CQ68D51 928 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 LMBRD2Q68DH5 695 aaPredicted RBP11.36□□□□□ -0.59
CALD1-203ENST00000393118 FAM43BQ6ZT52 329 aaPredicted RBP11.36□□□□□ -0.59
CALD1-203ENST00000393118 CREG2Q8IUH2 290 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 BAP1Q92560 729 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 RNF146Q9NTX7 359 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 SEL1LQ9UBV2 794 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 SNX24Q9Y343 169 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 TMEM150BA6NC51 233 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 DAPK3O43293 454 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
CALD1-203ENST00000393118 MYBL2P10244 700 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 NBPF9Q3BBW0 867 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 TRIM68Q6AZZ1 485 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 ATP6V0A1Q93050 837 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 POLR3CQ9BUI4 534 aaPredicted RBP11.36□□□□□ -0.59
CALD1-203ENST00000393118 AGPAT3Q9NRZ7 376 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 GINS2Q9Y248 185 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.36□□□□□ -0.59
CALD1-203ENST00000393118 ZHX2Q9Y6X8 837 aa11.36□□□□□ -0.59
CALD1-203ENST00000393118 CASZ1Q86V15 1759 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms