RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 CCDC188H7C350 402 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 KCNJ2P63252 427 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 ELF3P78545 371 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-201ENST00000391941 PPP4R3CPQ6ZMV5 832 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 DDX23Q9BUQ8 820 aaKnown RBP19.5■□□□□ 0.71
ERCC2-201ENST00000391941 FAM129AQ9BZQ8 928 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 DNM3Q9UQ16 869 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 STAT1P42224 750 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 KLRC3Q07444 240 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 IKQ13123 557 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-201ENST00000391941 MTMR3Q13615 1198 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 ZKSCAN8Q15776 578 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-201ENST00000391941 FRMD5Q7Z6J6 570 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 ZSWIM2Q8NEG5 633 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 ZNF317Q96PQ6 595 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-201ENST00000391941 KCNMB3Q9NPA1 279 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 RPTORQ8N122 1335 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 ARHGAP4P98171 946 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 NEDD9Q14511 834 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 LONRF1Q17RB8 773 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 AGBL2Q5U5Z8 902 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 MYCT1Q8N699 235 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 ATXN2LQ8WWM7 1075 aaKnown RBP19.49■□□□□ 0.71
ERCC2-201ENST00000391941 KAT5Q92993 513 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 TLCD1Q96CP7 247 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 ERP44Q9BS26 406 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 ATF5Q9Y2D1 282 aaPredicted RBP19.49■□□□□ 0.71
ERCC2-201ENST00000391941 UPP2O95045 317 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 GCFC2P16383 781 aaKnown RBP19.49■□□□□ 0.71
ERCC2-201ENST00000391941 PAX7P23759 505 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 PRKCIP41743 596 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 DLG4P78352 724 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 PLCB4Q15147 1175 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 TRIP13Q15645 432 aaPredicted RBP19.49■□□□□ 0.71
ERCC2-201ENST00000391941 DENND2CQ68D51 928 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 TPH2Q8IWU9 490 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 CTNNBL1Q8WYA6 563 aaPredicted RBP19.49■□□□□ 0.71
ERCC2-201ENST00000391941 FAM84AQ96KN4 292 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 GPR88Q9GZN0 384 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 PCIF1Q9H4Z3 704 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 NENFQ9UMX5 172 aa19.49■□□□□ 0.71
ERCC2-201ENST00000391941 THRAP3Q9Y2W1 955 aaKnown RBP19.49■□□□□ 0.71
ERCC2-201ENST00000391941 COL16A1Q07092 1604 aaPredicted RBP19.48■□□□□ 0.71
ERCC2-201ENST00000391941 FOXN3O00409 490 aaPredicted RBP19.48■□□□□ 0.71
ERCC2-201ENST00000391941 MEIS2O14770 477 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 RGS16O15492 202 aaPredicted RBP19.48■□□□□ 0.71
ERCC2-201ENST00000391941 PPFIA2O75334 1257 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 ACSL3O95573 720 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 SHMT1P34896 483 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 MESDQ14696 234 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 DUPD1Q68J44 220 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 PPP1R18Q6NYC8 613 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.48■□□□□ 0.71
ERCC2-201ENST00000391941 VPS36Q86VN1 386 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 FAM186BQ8IYM0 893 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 SPICE1Q8N0Z3 855 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 CCDC197Q8NCU1 140 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 FAM118BQ9BPY3 351 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 SLITRK6Q9H5Y7 841 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 TRAF3IP3Q9Y228 551 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 CCT8L1PA6NM43 557 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 NSMFQ6X4W1 530 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 ANKRD42Q8N9B4 389 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 GDAP1Q8TB36 358 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 HOOK2Q96ED9 719 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 NOD2Q9HC29 1040 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 COL5A3P25940 1745 aaPredicted RBP19.48■□□□□ 0.71
ERCC2-201ENST00000391941 WNK3Q9BYP7 1800 aa19.48■□□□□ 0.71
ERCC2-201ENST00000391941 C5orf60A6NFR6 353 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 SOX5P35711 763 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 PTENP60484 403 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 MYO1EQ12965 1108 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 DRP2Q13474 957 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 SNX1Q13596 522 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 DOK7Q18PE1 504 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 NEK9Q8TD19 979 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 LMBR1Q8WVP7 490 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 TXLNGYQ9BZA5 131 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 INTS9Q9NV88 658 aaKnown RBP19.47■□□□□ 0.71
ERCC2-201ENST00000391941 SERPINB13Q9UIV8 391 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 ALG6Q9Y672 507 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 CNTNAP4Q9C0A0 1308 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 KIAA0391O15091 583 aaKnown RBP19.47■□□□□ 0.71
ERCC2-201ENST00000391941 TBCAO75347 108 aaKnown RBP19.47■□□□□ 0.71
ERCC2-201ENST00000391941 ATP6V1G2O95670 118 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 DAB2IPQ5VWQ8 1189 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 PHLDB3Q6NSJ2 640 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 EPM2AIP1Q7L775 607 aaPredicted RBP19.47■□□□□ 0.71
ERCC2-201ENST00000391941 ETNPPLQ8TBG4 499 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 ACTR5Q9H9F9 607 aaPredicted RBP19.47■□□□□ 0.71
ERCC2-201ENST00000391941 SLC24A3Q9HC58 644 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 GRHL1Q9NZI5 618 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 PKD2L1Q9P0L9 805 aa19.47■□□□□ 0.71
ERCC2-201ENST00000391941 TNRC6CQ9HCJ0 1690 aaKnown RBP19.46■□□□□ 0.71
ERCC2-201ENST00000391941 PPIP5K2O43314 1243 aa19.46■□□□□ 0.71
ERCC2-201ENST00000391941 CALUO43852 315 aaPredicted RBP19.46■□□□□ 0.71
ERCC2-201ENST00000391941 GH1P01241 217 aa19.46■□□□□ 0.71
ERCC2-201ENST00000391941 VPS41P49754 854 aa19.46■□□□□ 0.71
ERCC2-201ENST00000391941 GABPAQ06546 454 aa19.46■□□□□ 0.71
ERCC2-201ENST00000391941 KIAA1755Q5JYT7 1200 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms