RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 NFU1Q9UMS0 254 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 WDR91A4D1P6 747 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 ATP8B1O43520 1251 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 BNIP3LO60238 219 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 TMCC1O94876 653 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 NCLNQ969V3 563 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 TBC1D22BQ9NU19 505 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 BEST2Q8NFU1 509 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 NRBF2Q96F24 287 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 POLIQ9UNA4 740 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 SFNP31947 248 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 TTC39CQ8N584 583 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 FGFR1OP2Q9NVK5 253 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 LDHAP00338 332 aaKnown RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 LY9Q9HBG7 655 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 DIS3Q9Y2L1 958 aaKnown RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 MIF4GDA9UHW6 222 aaKnown RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 AFG1LQ8WV93 481 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 KRT82Q9NSB4 513 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 RNF146Q9NTX7 359 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 ASNSD1Q9NWL6 643 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 NMT2O60551 498 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 NCF2P19878 526 aaPredicted RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 STXBP2Q15833 593 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 KLHL8Q9P2G9 620 aaPredicted RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 RTTNQ86VV8 2226 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 POTEFA5A3E0 1075 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 POTEIP0CG38 1075 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 CAV1Q03135 178 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 POTEGQ6S5H5 508 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 MMP19Q99542 508 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 EVPLQ92817 2033 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 PIK3C2BO00750 1634 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 ZNF521Q96K83 1311 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 POTECB2RU33 542 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 PAPOLAP51003 745 aaKnown RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 SCG3Q8WXD2 468 aaKnown RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 DOPEY2Q9Y3R5 2298 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 KRT38O76015 456 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 CYP2E1P05181 493 aaPredicted RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 LXNQ9BS40 222 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 SUN2Q9UH99 717 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 UBE4BO95155 1302 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 M0QYV0 167 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 GPC3P51654 580 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 PIP4K2CQ8TBX8 421 aa13.14□□□□□ -0.31
KCNQ3-201ENST00000388996 SASH1O94885 1247 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 FAM133BQ5BKY9 247 aaKnown RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 HSPA4LO95757 839 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 HOXC10Q9NYD6 342 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 STAP1Q9ULZ2 295 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 SNX2O60749 519 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 MYBL1P10243 752 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 SZRD1Q7Z422 152 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 DNAJC12Q9UKB3 198 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 HUS1O60921 280 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 HLFQ16534 295 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 TRMT10CQ7L0Y3 403 aaKnown RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 MMTAG2Q9BU76 263 aaKnown RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 CCDC195A0A1B0GUA6 201 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 GCLMP48507 274 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 RASSF3Q86WH2 238 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 SUDS3Q9H7L9 328 aaPredicted RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 HNRNPCL2B2RXH8 293 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 HNRNPCL1O60812 293 aaKnown RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 APOEP02649 317 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 RNF168Q8IYW5 571 aaPredicted RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 H3BRJ5 948 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 CFLARO15519 480 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 DRP2Q13474 957 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 KIF19Q2TAC6 998 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 TRIM59Q8IWR1 403 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 TMEM35BQ8NCS4 154 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 GIPC2Q8TF65 315 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms