RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 E7ENQ6 273 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 GNA14O95837 355 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 ACADSP16219 412 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 RANBP1P43487 201 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 DRG2P55039 364 aaKnown RBP16.16■□□□□ 0.18
CTNS-202ENST00000381870 MARSP56192 900 aaKnown RBP16.16■□□□□ 0.18
CTNS-202ENST00000381870 FOXB2Q5VYV0 432 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 RNF43Q68DV7 783 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 GJB7Q6PEY0 223 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 KRT25Q7Z3Z0 450 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 CROCCP2Q86T23 111 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 ZCRB1Q8TBF4 217 aaKnown RBP16.16■□□□□ 0.18
CTNS-202ENST00000381870 SNX29Q8TEQ0 813 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 TMOD4Q9NZQ9 345 aa16.16■□□□□ 0.18
CTNS-202ENST00000381870 LRP5O75197 1615 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 GYG1P46976 350 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 GRM4Q14833 912 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 PARP6Q2NL67 630 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 OR52E8Q6IFG1 317 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 FOXR2Q6PJQ5 311 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 ARHGAP22Q7Z5H3 698 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 NBPF5PQ86XG9 351 aaPredicted RBP16.15■□□□□ 0.18
CTNS-202ENST00000381870 CERKQ8TCT0 537 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 ALG3Q92685 438 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 TXLNGQ9NUQ3 528 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 MTRF1LQ9UGC7 380 aaKnown RBP16.15■□□□□ 0.18
CTNS-202ENST00000381870 RASAL2Q9UJF2 1139 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 HDAC9Q9UKV0 1011 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 PCDH11XQ9BZA7 1347 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 PCDH11YQ9BZA8 1340 aa16.15■□□□□ 0.18
CTNS-202ENST00000381870 SMCO2A6NFE2 343 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 LGR5O75473 907 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 ABCB4P21439 1286 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 PON1P27169 355 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 NPEPPSP55786 919 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 TFAP4Q01664 338 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 ADCY1Q08828 1119 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 CALCRLQ16602 461 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 CMPK2Q5EBM0 449 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 TTC27Q6P3X3 843 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.14■□□□□ 0.18
CTNS-202ENST00000381870 KIFAP3Q92845 792 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 LRMDAQ9H2I8 198 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 DCP1AQ9NPI6 582 aaPredicted RBP16.14■□□□□ 0.18
CTNS-202ENST00000381870 TMEM260Q9NX78 707 aa16.14■□□□□ 0.18
CTNS-202ENST00000381870 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.18
CTNS-202ENST00000381870 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.18
CTNS-202ENST00000381870 BCL9O00512 1426 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 SMAPO00193 183 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 SLC37A4O43826 429 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 ENTPD5O75356 428 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 RARGP13631 454 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 PRKCIP41743 596 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 SEPT14Q6ZU15 432 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 VSIG1Q86XK7 387 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 APLFQ8IW19 511 aaPredicted RBP16.14■□□□□ 0.17
CTNS-202ENST00000381870 LNX1Q8TBB1 728 aaPredicted RBP16.14■□□□□ 0.17
CTNS-202ENST00000381870 FAM136AQ96C01 138 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 ERP27Q96DN0 273 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 MTMR9Q96QG7 549 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 LMCD1Q9NZU5 365 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
CTNS-202ENST00000381870 PCDHA3Q9Y5H8 950 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 COL1A1P02452 1464 aaPredicted RBP16.14■□□□□ 0.17
CTNS-202ENST00000381870 TNS2Q63HR2 1409 aa16.14■□□□□ 0.17
CTNS-202ENST00000381870 NPHP3-ACAD11A0A0J9YXS1 232 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 ACSL3O95573 720 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 TNIP1Q15025 636 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 TSNAXIP1Q2TAA8 658 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 FAM47EQ6ZV65 393 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 ZDHHC14Q8IZN3 488 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 ENDOVQ8N8Q3 282 aaKnown RBP16.13■□□□□ 0.17
CTNS-202ENST00000381870 SH3RF3Q8TEJ3 882 aaPredicted RBP16.13■□□□□ 0.17
CTNS-202ENST00000381870 CARD9Q9H257 536 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 EPHB2P29323 1055 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 PPATQ06203 517 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 CCDC15Q0P6D6 951 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 CUL3Q13618 768 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 PPP2R5EQ16537 467 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 MUM1Q2TAK8 710 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 INTS8Q75QN2 995 aaKnown RBP16.13■□□□□ 0.17
CTNS-202ENST00000381870 PRELID2Q8N945 189 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 SCFD1Q8WVM8 642 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 IFT43Q96FT9 208 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 NAP1L3Q99457 506 aaPredicted RBP16.13■□□□□ 0.17
CTNS-202ENST00000381870 KIAA1683Q9H0B3 1180 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 KCTD10Q9H3F6 313 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 G3BP2Q9UN86 482 aaKnown RBP16.13■□□□□ 0.17
CTNS-202ENST00000381870 CACNA1SQ13698 1873 aa16.13■□□□□ 0.17
CTNS-202ENST00000381870 USP17L3A6NCW0 530 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 USP17L4A6NCW7 530 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 GFPT2O94808 682 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 TDP2O95551 362 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 VCAM1P19320 739 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 STX2P32856 288 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 SESN3P58005 492 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 MTFR1Q15390 333 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 EXOC3L4Q17RC7 722 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 USP17L1Q7RTZ2 530 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 APBB1IPQ7Z5R6 666 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms