RNA–Protein interactions for RNA: ENST00000381271.6

KLHL42-201, Transcript of kelch like family member 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL42, Length 6,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-201ENST00000381271 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 SASH1O94885 1247 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 NFKBIAP25963 317 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 PSMC1P62191 440 aaKnown RBP16.91■□□□□ 0.3
KLHL42-201ENST00000381271 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 MAPK6Q16659 721 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 ELMSAN1Q6PJG2 1045 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 ST13P4Q8IZP2 240 aaPredicted RBP16.91■□□□□ 0.3
KLHL42-201ENST00000381271 MDM2Q00987 491 aaPredicted RBP16.91■□□□□ 0.3
KLHL42-201ENST00000381271 C1orf146Q5VVC0 180 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 C16orf87Q6PH81 154 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 CYFIP1Q7L576 1253 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 ZFYVE19Q96K21 471 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 ASNSD1Q9NWL6 643 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 PDCLQ13371 301 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 RASGRF1Q13972 1273 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 RFWD2Q8NHY2 731 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
KLHL42-201ENST00000381271 MAP10Q9P2G4 905 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 IPO5O00410 1097 aaKnown RBP16.91■□□□□ 0.3
KLHL42-201ENST00000381271 NMT2O60551 498 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 TTC8Q8TAM2 541 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 SP110Q9HB58 689 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 TMEM260Q9NX78 707 aa16.91■□□□□ 0.3
KLHL42-201ENST00000381271 DFFAO00273 331 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 ZRANB2O95218 330 aaKnown RBP eCLIP16.9■□□□□ 0.3
KLHL42-201ENST00000381271 ERFP50548 548 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 HPS4Q9NQG7 708 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 ZFP69BQ9UJL9 534 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 E9PMD0 336 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 LDHAP00338 332 aaKnown RBP16.9■□□□□ 0.3
KLHL42-201ENST00000381271 STXBP2Q15833 593 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 ALS2CLQ60I27 953 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 NAF1Q96HR8 494 aaKnown RBP16.9■□□□□ 0.3
KLHL42-201ENST00000381271 YIPF2Q9BWQ6 316 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 RAP1GDS1P52306 607 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 MORF4L2Q15014 288 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 DDIASQ8IXT1 998 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 CENPKQ9BS16 269 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 NNMTP40261 264 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 SUSD4Q5VX71 490 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 SNRNP48Q6IEG0 339 aaKnown RBP16.9■□□□□ 0.3
KLHL42-201ENST00000381271 LRRC63Q05C16 580 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
KLHL42-201ENST00000381271 BTBD6Q96KE9 485 aa16.9■□□□□ 0.3
KLHL42-201ENST00000381271 NUP153P49790 1475 aaKnown RBP16.89■□□□□ 0.3
KLHL42-201ENST00000381271 hCG_1984214I3L0E3 225 aa16.89■□□□□ 0.3
KLHL42-201ENST00000381271 NCK2O43639 380 aa16.89■□□□□ 0.3
KLHL42-201ENST00000381271 SEPT2Q15019 361 aa16.89■□□□□ 0.3
KLHL42-201ENST00000381271 ZNF713Q8N859 430 aaPredicted RBP16.89■□□□□ 0.3
KLHL42-201ENST00000381271 SAAL1Q96ER3 474 aa16.89■□□□□ 0.3
KLHL42-201ENST00000381271 NUP85Q9BW27 656 aa16.89■□□□□ 0.3
KLHL42-201ENST00000381271 PNMA3Q9UL41 463 aa16.89■□□□□ 0.3
KLHL42-201ENST00000381271 SWSAP1Q6NVH7 229 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 URGCPQ8TCY9 931 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 RNF103-CHMP3A0A140T963 221 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 SERPIND1P05546 499 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 LCP1P13796 627 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 SCG3Q8WXD2 468 aaKnown RBP16.89■□□□□ 0.29
KLHL42-201ENST00000381271 ZMAT2Q96NC0 199 aaKnown RBP16.89■□□□□ 0.29
KLHL42-201ENST00000381271 TMCC1O94876 653 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
KLHL42-201ENST00000381271 EFTUD2Q15029 972 aaKnown RBP eCLIP16.89■□□□□ 0.293e-6■■■■■ 41.9
KLHL42-201ENST00000381271 RHOT2Q8IXI1 618 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 OR6P1Q8NGX9 317 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 FAM217BQ9NTX9 383 aaPredicted RBP16.89■□□□□ 0.29
KLHL42-201ENST00000381271 DCTN3O75935 186 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 STAT3P40763 770 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 EIF3BP55884 814 aaKnown RBP16.89■□□□□ 0.29
KLHL42-201ENST00000381271 LRRC14Q15048 493 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 RNF14Q9UBS8 474 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 SNAP23O00161 211 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 IFNAR1P17181 557 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 CRKP46108 304 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 GRAMD4Q6IC98 578 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 PADI6Q6TGC4 694 aa16.89■□□□□ 0.29
KLHL42-201ENST00000381271 PRELPP51888 382 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 UBE3AQ05086 875 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 BEST2Q8NFU1 509 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 CHCHD3Q9NX63 227 aaKnown RBP16.88■□□□□ 0.29
KLHL42-201ENST00000381271 CLCA2Q9UQC9 943 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 GNAT1P11488 350 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 GPS1Q13098 491 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 FAM180AQ6UWF9 173 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 ARL8AQ96BM9 186 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 CDV3Q9UKY7 258 aaKnown RBP16.88■□□□□ 0.29
KLHL42-201ENST00000381271 CTIFO43310 598 aaKnown RBP16.88■□□□□ 0.29
KLHL42-201ENST00000381271 NR3C1P04150 777 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 LTKP29376 864 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 AARSP49588 968 aaKnown RBP eCLIP16.88■□□□□ 0.29
KLHL42-201ENST00000381271 FSCBQ5H9T9 825 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 TTLL11Q8NHH1 800 aa16.88■□□□□ 0.29
KLHL42-201ENST00000381271 B4GALNT2Q8NHY0 566 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms