RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 VPS16Q9H269 839 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 SEMA6BQ9H3T3 888 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 VRTNQ9H8Y1 702 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 KCNH7Q9NS40 1196 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 Q9Y3F1 56 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 PLCG1P19174 1290 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 CNTN2Q02246 1040 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 SP3Q02447 781 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 MTMR1Q13613 665 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 ARHGEF6Q15052 776 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 ZNF746Q6NUN9 644 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-202ENST00000379996 CCDC62Q6P9F0 684 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 ZC3H3Q8IXZ2 948 aaKnown RBP8.51□□□□□ -1.05
CDKL5-202ENST00000379996 CEP112Q8N8E3 955 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 NOA1Q8NC60 698 aaKnown RBP8.51□□□□□ -1.05
CDKL5-202ENST00000379996 ARGLU1Q9NWB6 273 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-202ENST00000379996 KDM3AQ9Y4C1 1321 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 PEX10O60683 326 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 LYPLA2O95372 231 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 HOXD8P13378 290 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-202ENST00000379996 SFNP31947 248 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 CTHP32929 405 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 STAT6P42226 847 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 KLK7P49862 253 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 GRB10Q13322 594 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 TMEM119Q4V9L6 283 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 ZNF569Q5MCW4 686 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 ANKRD40Q6AI12 368 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 CENPPQ6IPU0 288 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 NOC3LQ8WTT2 800 aaKnown RBP8.51□□□□□ -1.05
CDKL5-202ENST00000379996 WBP1LQ9NX94 342 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 ZMIZ1Q9ULJ6 1067 aa8.51□□□□□ -1.05
CDKL5-202ENST00000379996 IGKV6D-21A0A0A0MT36 114 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 SKIP12755 728 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 EIF2AK2P19525 551 aaKnown RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 VSNL1P62760 191 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 KRT76Q01546 638 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 STK4Q13043 487 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 ASTE1Q2TB18 679 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 ZCWPW2Q504Y3 356 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 PRR16Q569H4 304 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 TAPT1Q6NXT6 567 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 BLOC1S3Q6QNY0 202 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 CCDC34Q96HJ3 373 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 NAPGQ99747 312 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 TUFT1Q9NNX1 390 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 CTAGE9A4FU28 777 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 GPR25O00155 361 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 N4BP3O15049 544 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 CCNE1P24864 410 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 OAS2P29728 719 aaKnown RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 AARSP49588 968 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 JAK3P52333 1124 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 TUBB4BP68371 445 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 SMC1AQ14683 1233 aaKnown RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 FILIP1LQ4L180 1135 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 TEX35Q5T0J7 233 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 DPY19L2P1Q6NXN4 242 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 LRRC55Q6ZSA7 311 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 ARMCX2Q7L311 632 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 PACS2Q86VP3 889 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 TRIM47Q96LD4 638 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 TINF2Q9BSI4 451 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 ZNF577Q9BSK1 485 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 TEKT3Q9BXF9 490 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 ABHD16BQ9H3Z7 469 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 AGPAT5Q9NUQ2 364 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 PCDHA12Q9UN75 941 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 EIF3CLB5ME19 914 aaKnown RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 IPO5O00410 1097 aaKnown RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 KIF5CO60282 957 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 SNAI1O95863 264 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 ARP10275 920 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 HOXD10P28358 340 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 KRT9P35527 623 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 ZNF76P36508 570 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 KIF22Q14807 665 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 NPLOC4Q8TAT6 608 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 FAM174AQ8TBP5 190 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 CPLX3Q8WVH0 158 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 P2RX5Q93086 422 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 EIF3CQ99613 913 aaKnown RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 PPME1Q9Y570 386 aa8.5□□□□□ -1.05
CDKL5-202ENST00000379996 EPN1Q9Y6I3 576 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-202ENST00000379996 EPHB6O15197 1021 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 GCGRP47871 477 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 ITGB3BPQ13352 177 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-202ENST00000379996 NEDD9Q14511 834 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 EPHA7Q15375 998 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 HAUS3Q68CZ6 603 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 IQSEC1Q6DN90 963 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 OR8K1Q8NGG5 319 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 AFAP1L1Q8TED9 768 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 HSD17B14Q9BPX1 270 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 LACRTQ9GZZ8 138 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 STK17AQ9UEE5 414 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 TFR2Q9UP52 801 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 PCDHA2Q9Y5H9 948 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 TNPO2O14787 897 aaKnown RBP8.49□□□□□ -1.05
CDKL5-202ENST00000379996 FKTNO75072 461 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms