RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 SUPT20HL2P0C7V6 817 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 GHRP10912 638 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 FGFR4P22455 802 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 ABCD1P33897 745 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 PTGER2P43116 358 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 PASD1Q8IV76 773 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 SHCBP1Q8NEM2 672 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF653Q96CK0 615 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 LRRC45Q96CN5 670 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 RWDD2AQ9UIY3 292 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 SNX9Q9Y5X1 595 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 IKBKGQ9Y6K9 419 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 BPIFB4P59827 614 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 CYP27A1Q02318 531 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 PCNX4Q63HM2 1172 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 DAAM2Q86T65 1068 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 IFT81Q8WYA0 676 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 NUCKS1Q9H1E3 243 aaKnown RBP9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 SEL1LQ9UBV2 794 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 AGAP1Q9UPQ3 857 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 SNCAIPQ9Y6H5 919 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 RGPD2P0DJD1 1756 aa9.16□□□□□ -0.94
CRNKL1-202ENST00000377340 ARHGEF37A1IGU5 675 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 STAM2O75886 525 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF18P17022 549 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 ANXA13P27216 316 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 IRX5P78411 483 aaPredicted RBP9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 KCNH2Q12809 1159 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 MESDQ14696 234 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 THEM5Q8N1Q8 247 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 ENOX1Q8TC92 643 aaKnown RBP9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 PDGFCQ9NRA1 345 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 STRCQ7RTU9 1775 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 ZBTB39O15060 712 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 NPM3O75607 178 aaKnown RBP9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 KCNA3P22001 575 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 VAMP7P51809 220 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 GABPAQ06546 454 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 DUOXA2Q1HG44 320 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 TEX2Q8IWB9 1127 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 RNF139Q8WU17 664 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 PPM1EQ8WY54 764 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 SECISBP2LQ93073 1101 aaKnown RBP9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 DNAJC18Q9H819 358 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 TYW1Q9NV66 732 aaKnown RBP9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 A0A087WZ62 844 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 A8MXQ7 604 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 MYO1FO00160 1098 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 ITGA4P13612 1032 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 GRK4P32298 578 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 VPS41P49754 854 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 OAZ1P54368 228 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 CCL23P55773 120 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 CFAP58Q5T655 872 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 SND1Q7KZF4 910 aaKnown RBP eCLIP9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 NME8Q8N427 588 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 IL31RAQ8NI17 732 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 FDXACB1Q9BRP7 624 aaPredicted RBP9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 FAM204AQ9H8W3 233 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 ADAMTS1Q9UHI8 967 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 NRBP1Q9UHY1 535 aa9.15□□□□□ -0.94
CRNKL1-202ENST00000377340 ANKRD26Q9UPS8 1709 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 CICQ96RK0 1608 aaPredicted RBP9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 PDGFRBP09619 1106 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 RHOXF2BP0C7M4 288 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 TGFB3P10600 412 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 KRT81Q14533 505 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 KRT31Q15323 416 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 CDO1Q16878 200 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 ATF7IP2Q5U623 682 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 KAZNQ674X7 775 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 MRRFQ96E11 262 aaKnown RBP9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 RHOXF2Q9BQY4 288 aa9.15□□□□□ -0.95
CRNKL1-202ENST00000377340 PTPRZ1P23471 2315 aaPredicted RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 PRRC2BQ5JSZ5 2229 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 ARHGAP6O43182 974 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 PPFIA4O75335 1185 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 NPTXRO95502 500 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 CYP11B2P19099 503 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 TOB1P50616 345 aaPredicted RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 PSMC6P62333 389 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 TSPY1Q01534 308 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 ITKQ08881 620 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 CRHR2Q13324 411 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 TMCO3Q6UWJ1 677 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 PPP1R21Q6ZMI0 780 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 MAATS1Q7Z4T9 603 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 UBL4BQ8N7F7 174 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 KIAA1524Q8TCG1 905 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 NSMCE1Q8WV22 266 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 DYDC1Q8WWB3 177 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 BRI3BPQ8WY22 251 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 KCNB2Q92953 911 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 KIAA1586Q9HCI6 787 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 AGO4Q9HCK5 861 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 RNF19AQ9NV58 838 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 RASAL2Q9UJF2 1139 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 ZBTB48P10074 688 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms