RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 PPP1R16BQ96T49 567 aa16.97■□□□□ 0.31
SS18L1-202ENST00000370848 LXNQ9BS40 222 aa16.97■□□□□ 0.31
SS18L1-202ENST00000370848 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
SS18L1-202ENST00000370848 PCDHA12Q9UN75 941 aa16.97■□□□□ 0.31
SS18L1-202ENST00000370848 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 MAGEB2O15479 319 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 DCXO43602 365 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 QARSP47897 775 aaKnown RBP16.96■□□□□ 0.31
SS18L1-202ENST00000370848 CLCN3P51790 818 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 PSMC5P62195 406 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 COASYQ13057 564 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 TMEM266Q2M3C6 531 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 XKR3Q5GH77 459 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 ANO5Q75V66 913 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 FAM228AQ86W67 206 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 LRRC71Q8N4P6 559 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 ZNF579Q8NAF0 562 aaKnown RBP16.96■□□□□ 0.31
SS18L1-202ENST00000370848 SMRP1Q8NCR6 262 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 PPP2R3CQ969Q6 453 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 INTS4Q96HW7 963 aaKnown RBP16.96■□□□□ 0.31
SS18L1-202ENST00000370848 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 POP1Q99575 1024 aaKnown RBP16.96■□□□□ 0.31
SS18L1-202ENST00000370848 EIF2AK1Q9BQI3 630 aaKnown RBP16.96■□□□□ 0.31
SS18L1-202ENST00000370848 NRBP2Q9NSY0 501 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 TMEM161AQ9NX61 479 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 ST3GAL5Q9UNP4 418 aa16.96■□□□□ 0.31
SS18L1-202ENST00000370848 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 ZBTB39O15060 712 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 P4HBP07237 508 aaKnown RBP16.95■□□□□ 0.3
SS18L1-202ENST00000370848 IRS1P35568 1242 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 TECP42680 631 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 NPEPPSP55786 919 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 TARBP2Q15633 366 aaKnown RBP16.95■□□□□ 0.3
SS18L1-202ENST00000370848 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 METTL13Q8N6R0 699 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 POF1BQ8WVV4 589 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 ADAM2Q99965 735 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 ADAMTS10Q9H324 1103 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.95■□□□□ 0.3
SS18L1-202ENST00000370848 CLEC1BQ9P126 229 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 ZNF318Q5VUA4 2279 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 WDFY4Q6ZS81 3184 aa16.95■□□□□ 0.3
SS18L1-202ENST00000370848 A0A087WWV3 80 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 LINC01565O15544 149 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 SLITRK3O94933 977 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 GLP2RO95838 553 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 VTNP04004 478 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 SYT1P21579 422 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 SSTR3P32745 418 aaPredicted RBP16.94■□□□□ 0.3
SS18L1-202ENST00000370848 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.3
SS18L1-202ENST00000370848 GATMP50440 423 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 PTGDRQ13258 359 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 ORC2Q13416 577 aaPredicted RBP16.94■□□□□ 0.3
SS18L1-202ENST00000370848 DRP2Q13474 957 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 HERC4Q5GLZ8 1057 aaPredicted RBP16.94■□□□□ 0.3
SS18L1-202ENST00000370848 PDE12Q6L8Q7 609 aaKnown RBP16.94■□□□□ 0.3
SS18L1-202ENST00000370848 ADGRD2Q7Z7M1 963 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 TPH2Q8IWU9 490 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 SPRYD3Q8NCJ5 442 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 ZNF668Q96K58 619 aaPredicted RBP16.94■□□□□ 0.3
SS18L1-202ENST00000370848 NIFKQ9BYG3 293 aaKnown RBP16.94■□□□□ 0.3
SS18L1-202ENST00000370848 CD207Q9UJ71 328 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 LZTS1Q9Y250 596 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 PCDHB7Q9Y5E2 793 aa16.94■□□□□ 0.3
SS18L1-202ENST00000370848 FAM86C2PA6NEL3 165 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 FSCN2O14926 492 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 NFX1Q12986 1120 aaKnown RBP16.93■□□□□ 0.3
SS18L1-202ENST00000370848 KCNC3Q14003 757 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 CBX2Q14781 532 aaPredicted RBP16.93■□□□□ 0.3
SS18L1-202ENST00000370848 IL17AQ16552 155 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 KIZQ2M2Z5 673 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 RILPL1Q5EBL4 403 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 EFCAB12Q6NXP0 572 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 OSMRQ99650 979 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 HSD17B14Q9BPX1 270 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 KCNH6Q9H252 994 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 CWH43Q9H720 699 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 AAASQ9NRG9 546 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 BMP2KQ9NSY1 1161 aaPredicted RBP16.93■□□□□ 0.3
SS18L1-202ENST00000370848 RNF19AQ9NV58 838 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 LRFN2Q9ULH4 789 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 GINS2Q9Y248 185 aa16.93■□□□□ 0.3
SS18L1-202ENST00000370848 DENND3A2RUS2 1198 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 MED24O75448 989 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 SPATA31C1P0DKV0 1188 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 EIF4BP23588 611 aaKnown RBP16.92■□□□□ 0.3
SS18L1-202ENST00000370848 YWHABP31946 246 aaKnown RBP16.92■□□□□ 0.3
SS18L1-202ENST00000370848 PLCB3Q01970 1234 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 TBC1D8BQ0IIM8 1120 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 RESTQ13127 1097 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 PAN2Q504Q3 1202 aaKnown RBP16.92■□□□□ 0.3
SS18L1-202ENST00000370848 FAM173BQ6P4H8 233 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 TMEM184AQ6ZMB5 413 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 C4orf19Q8IY42 314 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 RSPH1Q8WYR4 309 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 CDCA3Q99618 268 aaPredicted RBP16.92■□□□□ 0.3
SS18L1-202ENST00000370848 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 TMEM117Q9H0C3 514 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms