RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 PLA2G4DQ86XP0 818 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 HERC6Q8IVU3 1022 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 DHX37Q8IY37 1157 aaKnown RBP9.78□□□□□ -0.84
SNX27-201ENST00000368838 C7orf31Q8N865 590 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 ENOX1Q8TC92 643 aaKnown RBP9.78□□□□□ -0.84
SNX27-201ENST00000368838 LARP4BQ92615 738 aaKnown RBP9.78□□□□□ -0.84
SNX27-201ENST00000368838 DHX58Q96C10 678 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 PNMA5Q96PV4 448 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 ASB2Q96Q27 587 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 TRIM9Q9C026 710 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 BLOC1S4Q9NUP1 217 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 RAPGEFL1Q9UHV5 662 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 PCDHGA4Q9Y5G9 962 aa9.78□□□□□ -0.84
SNX27-201ENST00000368838 RALGAPA2Q2PPJ7 1873 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 XIRP2A4UGR9 3374 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 TNFRSF10AO00220 468 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 TLL1O43897 1013 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 NBNO60934 754 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 EIF3JO75822 258 aaKnown RBP9.77□□□□□ -0.85
SNX27-201ENST00000368838 RGS20O76081 388 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 GGPS1O95749 300 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 SELPP16109 830 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 PLCG1P19174 1290 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 SFNP31947 248 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 RFC2P35250 354 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 ZNF76P36508 570 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 RFC5P40937 340 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 KCNJ6P48051 423 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 KCNQ1P51787 676 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 WDR5P61964 334 aaKnown RBP9.77□□□□□ -0.85
SNX27-201ENST00000368838 MRPS9P82933 396 aaKnown RBP9.77□□□□□ -0.85
SNX27-201ENST00000368838 SP2Q02086 613 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 TAP1Q03518 808 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.85
SNX27-201ENST00000368838 EHHADHQ08426 723 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 CCDC173Q0VFZ6 552 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 KARSQ15046 597 aaKnown RBP9.77□□□□□ -0.85
SNX27-201ENST00000368838 DGKDQ16760 1214 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 HSDL1Q3SXM5 330 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 ZNF658Q5TYW1 1059 aaPredicted RBP9.77□□□□□ -0.85
SNX27-201ENST00000368838 SV2BQ7L1I2 683 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 NLRX1Q86UT6 975 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 AFAP1L1Q8TED9 768 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 RAD54LQ92698 747 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 KCNN1Q92952 543 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 SLC9A7Q96T83 725 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 ZBED2Q9BTP6 218 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 CBX8Q9HC52 389 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 KCNH7Q9NS40 1196 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 GTF2IRD1Q9UHL9 959 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 TELO2Q9Y4R8 837 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 MTCH2Q9Y6C9 303 aa9.77□□□□□ -0.85
SNX27-201ENST00000368838 MYH9P35579 1960 aaKnown RBP9.77□□□□□ -0.85
SNX27-201ENST00000368838 FRMD3A2A2Y4 597 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 IPO5O00410 1097 aaKnown RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 KLRC4O43908 158 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 SPATA31C1P0DKV0 1188 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 CKBP12277 381 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 BMP6P22004 513 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 UBA1P22314 1058 aaKnown RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 MRPS5P82675 430 aaKnown RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 KRT76Q01546 638 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 PNOCQ13519 176 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 LAMC2Q13753 1193 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 NCAPHQ15003 741 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 DPCR1Q3MIW9 517 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 ZNF618Q5T7W0 954 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 KCNV1Q6PIU1 500 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 CCDC155Q8N6L0 562 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 PDILTQ8N807 584 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 SYT2Q8N9I0 419 aaPredicted RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 GIMAP8Q8ND71 665 aaPredicted RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 SNX29Q8TEQ0 813 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 ATXN2LQ8WWM7 1075 aaKnown RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 CCDC47Q96A33 483 aaKnown RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 SPATA33Q96N06 139 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 TEKT3Q9BXF9 490 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 AGO4Q9HCK5 861 aaKnown RBP9.76□□□□□ -0.85
SNX27-201ENST00000368838 MAN1B1Q9UKM7 699 aa9.76□□□□□ -0.85
SNX27-201ENST00000368838 POTEMA6NI47 508 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 SPATA31C2B4DYI2 1134 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 MARCH6O60337 910 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 DKC1O60832 514 aaKnown RBP eCLIP9.75□□□□□ -0.85
SNX27-201ENST00000368838 F2P00734 622 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 CCND2P30279 289 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 JAK3P52333 1124 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 SP4Q02446 784 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 MTMR1Q13613 665 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 CUL4BQ13620 913 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 DHX8Q14562 1220 aaKnown RBP9.75□□□□□ -0.85
SNX27-201ENST00000368838 MBTPS1Q14703 1052 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 GNPTABQ3T906 1256 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 CELF3Q5SZQ8 465 aaKnown RBP9.75□□□□□ -0.85
SNX27-201ENST00000368838 C6orf132Q5T0Z8 1188 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 LRCH2Q5VUJ6 765 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 ZNF746Q6NUN9 644 aaPredicted RBP9.75□□□□□ -0.85
SNX27-201ENST00000368838 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms