RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 ERVK-5Q9HDB9 667 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 CXXC1Q9P0U4 656 aaPredicted RBP20.72■□□□□ 0.91
LMNA-204ENST00000368298 RBAK-RBAKDNI3L0D1 243 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 GLRA2P23416 452 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 GSE1Q14687 1217 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 RRAGBQ5VZM2 374 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 RESP18Q5W5W9 173 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 CCDC73Q6ZRK6 1079 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 ASAP3Q8TDY4 903 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 LARP4BQ92615 738 aaKnown RBP20.71■□□□□ 0.91
LMNA-204ENST00000368298 KIFAP3Q92845 792 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 RUSC1Q9BVN2 902 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 FTHL17Q9BXU8 183 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 POLR3FQ9H1D9 316 aaPredicted RBP20.71■□□□□ 0.91
LMNA-204ENST00000368298 GPRC5CQ9NQ84 441 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 MICAL3Q7RTP6 2002 aa20.71■□□□□ 0.91
LMNA-204ENST00000368298 A0A087X0B3 334 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 PAK2Q13177 524 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 TFDP1Q14186 410 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 FAM102BQ5T8I3 360 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 SRGAP1Q7Z6B7 1085 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 FAM228AQ86W67 206 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 PHOSPHO2Q8TCD6 241 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 NLRP4Q96MN2 994 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 ST3GAL5Q9UNP4 418 aa20.7■□□□□ 0.9
LMNA-204ENST00000368298 SRGAP2CP0DJJ0 459 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 CMA1P23946 247 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 PTENP60484 403 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 WDR5P61964 334 aaKnown RBP20.69■□□□□ 0.9
LMNA-204ENST00000368298 MAPK7Q13164 816 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 CAPSQ13938 189 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 SKOR2Q2VWA4 1001 aaPredicted RBP20.69■□□□□ 0.9
LMNA-204ENST00000368298 ARSHQ5FYA8 562 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 MAEAQ7L5Y9 396 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 DAW1Q8N136 415 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 RNF149Q8NC42 400 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 ZNF668Q96K58 619 aaPredicted RBP20.69■□□□□ 0.9
LMNA-204ENST00000368298 SCLT1Q96NL6 688 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 TMX1Q9H3N1 280 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 C17orf75Q9HAS0 396 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 SLC4A7Q9Y6M7 1214 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 MCM6Q14566 821 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 PCBP1Q15365 356 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■□□□□ 9
LMNA-204ENST00000368298 E2F4Q16254 413 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 DRC1Q96MC2 740 aa20.69■□□□□ 0.9
LMNA-204ENST00000368298 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.68■□□□□ 0.9
LMNA-204ENST00000368298 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.68■□□□□ 0.9
LMNA-204ENST00000368298 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.68■□□□□ 0.9
LMNA-204ENST00000368298 SSBP05455 408 aaKnown RBP eCLIP20.68■□□□□ 0.9
LMNA-204ENST00000368298 NAMPTP43490 491 aa20.68■□□□□ 0.9
LMNA-204ENST00000368298 PHKA2P46019 1235 aa20.68■□□□□ 0.9
LMNA-204ENST00000368298 NFX1Q12986 1120 aaKnown RBP20.68■□□□□ 0.9
LMNA-204ENST00000368298 PPP2R5AQ15172 486 aa20.68■□□□□ 0.9
LMNA-204ENST00000368298 RTN4RL1Q86UN2 441 aaPredicted RBP20.68■□□□□ 0.9
LMNA-204ENST00000368298 BSNDQ8WZ55 320 aa20.68■□□□□ 0.9
LMNA-204ENST00000368298 SLC9A7Q96T83 725 aa20.68■□□□□ 0.9
LMNA-204ENST00000368298 TSPYL2Q9H2G4 693 aaPredicted RBP20.68■□□□□ 0.9
LMNA-204ENST00000368298 CUEDC2Q9H467 287 aa20.68■□□□□ 0.9
LMNA-204ENST00000368298 FAM13BQ9NYF5 915 aa20.68■□□□□ 0.9
LMNA-204ENST00000368298 ODF2LQ9ULJ1 636 aa20.68■□□□□ 0.9
LMNA-204ENST00000368298 FAM237AA0A1B0GTK4 181 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 A0A1W2PQ27 194 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 A0A1W2PQ64 194 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 A0A1W2PQD8 194 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 ZBBXA8MT70 800 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 ENPP3O14638 875 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 HIP1RO75146 1068 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 SFPQP23246 707 aaKnown RBP eCLIP20.67■□□□□ 0.9
LMNA-204ENST00000368298 STAT6P42226 847 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 DSC3Q14574 896 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 CDCA2Q69YH5 1023 aaPredicted RBP20.67■□□□□ 0.9
LMNA-204ENST00000368298 GPBP1Q86WP2 473 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 NTPCRQ9BSD7 190 aaKnown RBP20.67■□□□□ 0.9
LMNA-204ENST00000368298 PANK2Q9BZ23 570 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 MINDY3Q9H8M7 445 aa20.67■□□□□ 0.9
LMNA-204ENST00000368298 CSDE1O75534 798 aaKnown RBP20.66■□□□□ 0.9
LMNA-204ENST00000368298 KCNJ6P48051 423 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.66■□□□□ 0.9
LMNA-204ENST00000368298 SV2BQ7L1I2 683 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 PDILTQ8N807 584 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 IQUBQ8NA54 791 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 LINC01599Q8WXQ3 324 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 IFT74Q96LB3 600 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 PYM1Q9BRP8 204 aaKnown RBP20.66■□□□□ 0.9
LMNA-204ENST00000368298 CHST12Q9NRB3 414 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 KCNG1Q9UIX4 513 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 HPSEQ9Y251 543 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 PTPRSQ13332 1948 aa20.66■□□□□ 0.9
LMNA-204ENST00000368298 ATP2A2P16615 1042 aaKnown RBP20.65■□□□□ 0.9
LMNA-204ENST00000368298 SMAD3P84022 425 aaKnown RBP20.65■□□□□ 0.9
LMNA-204ENST00000368298 GIT2Q14161 759 aa20.65■□□□□ 0.9
LMNA-204ENST00000368298 CRIPAKQ8N1N5 446 aa20.65■□□□□ 0.9
LMNA-204ENST00000368298 TRAIPQ9BWF2 469 aa20.65■□□□□ 0.9
LMNA-204ENST00000368298 GDPD2Q9HCC8 539 aa20.65■□□□□ 0.9
LMNA-204ENST00000368298 POLD4Q9HCU8 107 aa20.65■□□□□ 0.9
LMNA-204ENST00000368298 RGS18Q9NS28 235 aa20.65■□□□□ 0.9
LMNA-204ENST00000368298 LMBRD1Q9NUN5 540 aa20.65■□□□□ 0.9
LMNA-204ENST00000368298 KCNH3Q9ULD8 1083 aa20.65■□□□□ 0.9
LMNA-204ENST00000368298 TTC3P53804 2025 aa20.64■□□□□ 0.9
LMNA-204ENST00000368298 MGEA5O60502 916 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms