RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 BBOF1Q8ND07 529 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 FAM149B1Q96BN6 582 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 PBKQ96KB5 322 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 GFPT2O94808 682 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 DEXIO95424 95 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 HSPA8P11142 646 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 TRABDQ9H4I3 376 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 ANKZF1Q9H8Y5 726 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 EVPLQ92817 2033 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 PTPREP23469 700 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 TFAP4Q01664 338 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 SLITRK6Q9H5Y7 841 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 SELENONQ9NZV5 590 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 PCDHGA3Q9Y5H0 932 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 UBOX5O94941 541 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 SEMA3DO95025 777 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 TUFMP49411 452 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 RESTQ13127 1097 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 KLC3Q6P597 504 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 CABP7Q86V35 215 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 AGRPO00253 132 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 ELF3P78545 371 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 BBS9Q3SYG4 887 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 AFPP02771 609 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 GRIN1Q05586 938 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 PTK2BQ14289 1009 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 SNX30Q5VWJ9 437 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 LRIG3Q6UXM1 1119 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 CCDC24Q8N4L8 307 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 CALML6Q8TD86 181 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 TLR3O15455 904 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 CUL4AQ13619 759 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 NDUFB5O43674 189 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 CIITAP33076 1130 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 DMP1Q13316 513 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 LRRC34Q8IZ02 419 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 TEX12Q9BXU0 123 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 PYGMP11217 842 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 KRT4P19013 534 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 HSPA9P38646 679 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 PSEN1P49768 467 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 BBS5Q8N3I7 341 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 UPF3AQ9H1J1 476 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 CUEDC2Q9H467 287 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 KRT16P08779 473 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 CASP1P29466 404 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 NSUN2Q08J23 767 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 PPM1KQ8N3J5 372 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 SNX25Q9H3E2 840 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 E7EWF7 191 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 WDR47O94967 919 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 CBX3Q13185 183 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 STKLD1Q8NE28 680 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 TEX33O43247 280 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 SLC5A4Q9NY91 659 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 RWDD2AQ9UIY3 292 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 PCM1Q15154 2024 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 H2AFZP0C0S5 128 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 SWT1Q5T5J6 900 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 H2AFVQ71UI9 128 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 ST13P5Q8NFI4 369 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 FAM153AQ9UHL3 310 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 GMEB1Q9Y692 573 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 MAP1BP46821 2468 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 RNF103-CHMP3A0A140T963 221 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 KRT76Q01546 638 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 REXO1Q8N1G1 1221 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 WDR60Q8WVS4 1066 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 LPIN2Q92539 896 aa11.75□□□□□ -0.53
CDC42BPA-205ENST00000366769 CFAP99D6REC4 459 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 ALOX15P16050 662 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZBTB33Q86T24 672 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 SIX6OS1Q8N1H7 587 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 TMEM191BP0C7N4 346 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 TRAPPC9Q96Q05 1148 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 HADHAP40939 763 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 KYNUQ16719 465 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 TJAP1Q5JTD0 557 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 SLC25A41Q8N5S1 370 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 RUBCNQ92622 972 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 APPL1Q9UKG1 709 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 CHD4Q14839 1912 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 UBE4BO95155 1302 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZNF263O14978 683 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 ORC4O43929 436 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 DDAH1O94760 285 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 MCL1Q07820 350 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 RNF207Q6ZRF8 634 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 UNC5CLQ8IV45 518 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 FRMPD2Q68DX3 1309 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 MFN2O95140 757 aa11.74□□□□□ -0.53
CDC42BPA-205ENST00000366769 BTBD6Q96KE9 485 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms