RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 KCNJ1P48048 391 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 KCTD1Q719H9 257 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 NKIRAS1Q9NYS0 192 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 PCDHA12Q9UN75 941 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
VAMP1-201ENST00000361716 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 LRRN2O75325 713 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 GFPT2O94808 682 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 PYGBP11216 843 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 ETS2P15036 469 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 ZNF76P36508 570 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 FKBP3Q00688 224 aaKnown RBP13.68□□□□□ -0.22
VAMP1-201ENST00000361716 C6orf118Q5T5N4 469 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 SUPT20HQ8NEM7 779 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 C18orf8Q96DM3 657 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 PITPNM3Q9BZ71 974 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 PABPC3Q9H361 631 aaKnown RBP13.68□□□□□ -0.22
VAMP1-201ENST00000361716 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 POTEB3A0JP26 581 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 POTECB2RU33 542 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 PAEPP09466 180 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 HHATQ5VTY9 493 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 POTEBQ6S5H4 581 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 ZNF384Q8TF68 577 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 SCFD2Q8WU76 684 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 RASAL2Q9UJF2 1139 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 MYH7BA7E2Y1 1941 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CCDC188H7C350 402 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 BRAFP15056 766 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 KCNA3P22001 575 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 MRPS35P82673 323 aaKnown RBP13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USH1GQ495M9 461 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 ZNF571Q7Z3V5 609 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-201ENST00000361716 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 SETDB2Q96T68 719 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CUEDC2Q9H467 287 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 ATP8A2Q9NTI2 1148 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 PKD2L1Q9P0L9 805 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 SPAG7O75391 227 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CBX6O95503 412 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 HNRNPH3P31942 346 aaKnown RBP13.67□□□□□ -0.22
VAMP1-201ENST00000361716 PTDSS1P48651 473 aaKnown RBP13.67□□□□□ -0.22
VAMP1-201ENST00000361716 ADCY7P51828 1080 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CNGA2Q16280 664 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CCNJLQ8IV13 435 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 SEPT12Q8IYM1 358 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 C4orf32Q8N8J7 132 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CNKSR1Q969H4 720 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CEP95Q96GE4 821 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 GORASP1Q9BQQ3 440 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 FGFBP2Q9BYJ0 223 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CCSER1Q9C0I3 900 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 STMN4Q9H169 189 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-201ENST00000361716 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
VAMP1-201ENST00000361716 CCDC160A6NGH7 325 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 FLOT1O75955 427 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 GRIK5Q16478 980 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 LRRC8CQ8TDW0 803 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
VAMP1-201ENST00000361716 RNF8O76064 485 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 MMP13P45452 471 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 KCNH2Q12809 1159 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 TBC1D25Q3MII6 688 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 PARP10Q53GL7 1025 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 PHLDB2Q86SQ0 1253 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 GBP7Q8N8V2 638 aaPredicted RBP13.66□□□□□ -0.22
VAMP1-201ENST00000361716 TLCD1Q96CP7 247 aa13.66□□□□□ -0.22
VAMP1-201ENST00000361716 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
VAMP1-201ENST00000361716 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
VAMP1-201ENST00000361716 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 FAM196BA6NMK8 535 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 PFDN1O60925 122 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 GCNT3O95395 438 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 DEUP1Q05D60 604 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ASTE1Q2TB18 679 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ZC3H12AQ5D1E8 599 aaKnown RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 HP1BP3Q5SSJ5 553 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 C1orf131Q8NDD1 294 aaKnown RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 TPCN2Q8NHX9 752 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ERP44Q9BS26 406 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 CALB2P22676 271 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 SP100P23497 879 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 GJC1P36383 396 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 PEX5P50542 639 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 COASYQ13057 564 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms