RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 SNRNP48Q6IEG0 339 aaKnown RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 PDE12Q6L8Q7 609 aaKnown RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 CCDC84Q86UT8 332 aaPredicted RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 PPP2R3CQ969Q6 453 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 LRRC1Q9BTT6 524 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 REPIN1Q9BWE0 567 aaKnown RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 PLVAPQ9BX97 442 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 A0A1W2PRG0 241 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 BTBD18B2RXH4 712 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 PROB1E7EW31 1015 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 OPA1O60313 960 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 LSP1P33241 339 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 METAP2P50579 478 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCL28-201ENST00000361115 SEC24CP53992 1094 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 CKAP4Q07065 602 aaKnown RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 PTK7Q13308 1070 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 IMMTQ16891 758 aaKnown RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 CEP85LQ5SZL2 805 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 ERMP1Q7Z2K6 904 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 ADGRA1Q86SQ6 560 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 ZNF473Q8WTR7 871 aaKnown RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 CTAGE1Q96RT6 745 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 IWS1Q96ST2 819 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 RAD9AQ99638 391 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 TCP11L1Q9NUJ3 509 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 CTNND2Q9UQB3 1225 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 PCDHB6Q9Y5E3 794 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 C5orf67F2Z3F1 127 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 SMIM22K7EJ46 135 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 IDH1O75874 414 aaKnown RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 EPB41P11171 864 aaKnown RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 IFT88Q13099 833 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 CYB5R4Q7L1T6 521 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 CEP57Q86XR8 500 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 NEDD1Q8NHV4 660 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 NCOA7Q8NI08 942 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 NEK9Q8TD19 979 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 RPGRIP1Q96KN7 1286 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 ZIM3Q96PE6 472 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 MYL10Q9BUA6 226 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 HAUS4Q9H6D7 363 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 SAP30BPQ9UHR5 308 aaKnown RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 SQORQ9Y6N5 450 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 DUSP10Q9Y6W6 482 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 DCXO43602 365 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 KRT14P02533 472 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 SSBP05455 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
CCL28-201ENST00000361115 C6orf222P0C671 652 aaPredicted RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 HOXD8P13378 290 aaPredicted RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 EEF2P13639 858 aaKnown RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 COPB1P53618 953 aaKnown RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 NNTQ13423 1086 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 NTRK3Q16288 839 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 HERC4Q5GLZ8 1057 aaPredicted RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 GNASQ5JWF2 1037 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 RALYLQ86SE5 291 aaKnown RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 MICU3Q86XE3 530 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 ANKRD35Q8N283 1001 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 ITFG2Q969R8 447 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 MRPL38Q96DV4 380 aaKnown RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 NACAP1Q9BZK3 213 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 CSRNP2Q9H175 543 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 EPN3Q9H201 632 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 KCNJ14Q9UNX9 436 aa8.44□□□□□ -1.06
CCL28-201ENST00000361115 YBX2Q9Y2T7 364 aaKnown RBP8.44□□□□□ -1.06
CCL28-201ENST00000361115 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 CSF2RAP15509 400 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 EDNRBP24530 442 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 ITGB8P26012 769 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 HTRA4P83105 476 aaPredicted RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 PPARDQ03181 441 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 ADGRE1Q14246 886 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 PLS1Q14651 629 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 WDR59Q6PJI9 974 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 APBB1IPQ7Z5R6 666 aaPredicted RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 YTHDF3Q7Z739 585 aaKnown RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 NOSTRINQ8IVI9 506 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 SCFD2Q8WU76 684 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 STAMQ92783 540 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 PABPC5Q96DU9 382 aaKnown RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 CDCA3Q99618 268 aaPredicted RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 SMARCAL1Q9NZC9 954 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 LIMA1Q9UHB6 759 aaKnown RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 LCTP09848 1927 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 TTC26A0AVF1 554 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 A6NJR5 290 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 SH2B2O14492 632 aaPredicted RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 RTN2O75298 545 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 STAM2O75886 525 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 AMHP03971 560 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 BMP3P12645 472 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 DYNLL1P63167 89 aaKnown RBP8.43□□□□□ -1.06
CCL28-201ENST00000361115 E2F5Q15329 346 aa8.43□□□□□ -1.06
CCL28-201ENST00000361115 PTGISQ16647 500 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms