RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 OTOP3Q7RTS5 596 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 TRMT1LQ7Z2T5 733 aaKnown RBP15.66■□□□□ 0.1
VPS29-201ENST00000360579 CABP7Q86V35 215 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 FLCNQ8NFG4 579 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 CRYGNQ8WXF5 182 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 ZBP1Q9H171 429 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 SMOC2Q9H3U7 446 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 CHST12Q9NRB3 414 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 NRBP2Q9NSY0 501 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 SAMM50Q9Y512 469 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 GVINP1Q7Z2Y8 2422 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 WDR64B1ANS9 1081 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 ZBTB43O43298 467 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 WEE2P0C1S8 567 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 CTSAP10619 480 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 SKIP12755 728 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 AOC1P19801 751 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 GPC3P51654 580 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 FUT2Q10981 343 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 JAKMIP3Q5VZ66 844 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 CREB3L3Q68CJ9 461 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 DDX53Q86TM3 631 aaKnown RBP15.65■□□□□ 0.1
VPS29-201ENST00000360579 ADSSL1Q8N142 457 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 LRRC71Q8N4P6 559 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 C12orf76Q8N812 135 aaPredicted RBP15.65■□□□□ 0.1
VPS29-201ENST00000360579 RTP3Q9BQQ7 232 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 LSG1Q9H089 658 aaKnown RBP15.65■□□□□ 0.1
VPS29-201ENST00000360579 SFXN1Q9H9B4 322 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 DCHS1Q96JQ0 3298 aa15.65■□□□□ 0.1
VPS29-201ENST00000360579 NT5C1B-RDH14C9J2C7 533 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 ZC3H11AO75152 810 aaKnown RBP eCLIP15.64■□□□□ 0.09
VPS29-201ENST00000360579 OATP04181 439 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 EPCAMP16422 314 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 TDGQ13569 410 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 COL9A3Q14050 684 aaPredicted RBP15.64■□□□□ 0.09
VPS29-201ENST00000360579 NECTIN1Q15223 517 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 RNF20Q5VTR2 975 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 CCDC149Q6ZUS6 474 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 CCDC105Q8IYK2 499 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 CCDC12Q8WUD4 166 aaPredicted RBP15.64■□□□□ 0.09
VPS29-201ENST00000360579 NLRP7Q8WX94 980 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 TRAIPQ9BWF2 469 aa15.64■□□□□ 0.09
VPS29-201ENST00000360579 EVPLQ92817 2033 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 ESYT2A0FGR8 921 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 RCAN1P53805 252 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 TBC1D8BQ0IIM8 1120 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 CWF19L1Q69YN2 538 aaKnown RBP15.63■□□□□ 0.09
VPS29-201ENST00000360579 GLB1LQ6UWU2 654 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 TMC5Q6UXY8 1006 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 GPR149Q86SP6 731 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 REXO1Q8N1G1 1221 aaKnown RBP15.63■□□□□ 0.09
VPS29-201ENST00000360579 SLC22A17Q8WUG5 538 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 IGSF21Q96ID5 467 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 GCOM2Q9BZD3 368 aaPredicted RBP15.63■□□□□ 0.09
VPS29-201ENST00000360579 C6orf50Q9HD87 102 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 FBXL21Q9UKT6 434 aa15.63■□□□□ 0.09
VPS29-201ENST00000360579 WDR87Q6ZQQ6 2873 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 GOLGA8AA7E2F4 631 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 GOLGA8BA8MQT2 603 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 GABBR2O75899 941 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 SFPQP23246 707 aaKnown RBP eCLIP15.62■□□□□ 0.09
VPS29-201ENST00000360579 PHKA2P46019 1235 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 PRKCEQ02156 737 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
VPS29-201ENST00000360579 PRR16Q569H4 304 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 AUTS2Q8WXX7 1259 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 EMILIN2Q9BXX0 1053 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 INO80BQ9C086 356 aaPredicted RBP15.62■□□□□ 0.09
VPS29-201ENST00000360579 ZMYND12Q9H0C1 365 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 SEMA4AQ9H3S1 761 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 DISC1Q9NRI5 854 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 DUSP12Q9UNI6 340 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 CACNA1AO00555 2505 aa15.62■□□□□ 0.09
VPS29-201ENST00000360579 MYO10Q9HD67 2058 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 CCDC196A0A1B0GTZ2 297 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 GALTP07902 379 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 FGFR4P22455 802 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 GNA11P29992 359 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 SFNP31947 248 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 CIITAP33076 1130 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 DNM2P50570 870 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 RAB27AP51159 221 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 RNASELQ05823 741 aaKnown RBP15.61■□□□□ 0.09
VPS29-201ENST00000360579 ANGPT1Q15389 498 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 NOMO2Q5JPE7 1267 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 TWF2Q6IBS0 349 aaKnown RBP15.61■□□□□ 0.09
VPS29-201ENST00000360579 KANK3Q6NY19 840 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 C15orf39Q6ZRI6 1047 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 TMEM173Q86WV6 379 aaPredicted RBP15.61■□□□□ 0.09
VPS29-201ENST00000360579 DTWD2Q8NBA8 298 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 ZNF668Q96K58 619 aaPredicted RBP15.61■□□□□ 0.09
VPS29-201ENST00000360579 ESYT1Q9BSJ8 1104 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 KCNK12Q9HB15 430 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 ANO2Q9NQ90 1003 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 TBC1D13Q9NVG8 400 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 IGSF9Q9P2J2 1179 aa15.61■□□□□ 0.09
VPS29-201ENST00000360579 ZNF292O60281 2723 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 ZNF862O60290 1169 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 NPR3P17342 541 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 KLRC2P26717 231 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms