RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SNCBQ16143 134 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 TSNAXIP1Q2TAA8 658 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 THNSL1Q8IYQ7 743 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 ATP6V1G3Q96LB4 118 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 TUFT1Q9NNX1 390 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 IL17RBQ9NRM6 502 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 MYO3BQ8WXR4 1341 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 BMP6P22004 513 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 BASP1P80723 227 aaKnown RBP17.55■□□□□ 0.4
SCAF1-201ENST00000360565 TMEM270Q6UE05 265 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 HNRNPLLQ8WVV9 542 aaKnown RBP17.55■□□□□ 0.4
SCAF1-201ENST00000360565 PSMC4P43686 418 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 SARNPP82979 210 aaKnown RBP17.54■□□□□ 0.4
SCAF1-201ENST00000360565 BEND6Q5SZJ8 279 aaPredicted RBP17.54■□□□□ 0.4
SCAF1-201ENST00000360565 TRIM50Q86XT4 487 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 HPCAL4Q9UM19 191 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 FMO5P49326 533 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 CARSP49589 748 aaKnown RBP17.54■□□□□ 0.4
SCAF1-201ENST00000360565 GUCY1A3Q02108 690 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 SNRNP48Q6IEG0 339 aaKnown RBP17.54■□□□□ 0.4
SCAF1-201ENST00000360565 ARHGAP27Q6ZUM4 889 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 SESTD1Q86VW0 696 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 NLRP4Q96MN2 994 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 JPH2Q9BR39 696 aaPredicted RBP17.54■□□□□ 0.4
SCAF1-201ENST00000360565 AKT3Q9Y243 479 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 NFIAQ12857 509 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 BBS9Q3SYG4 887 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 SLFN12LQ6IEE8 588 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 SWSAP1Q6NVH7 229 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 CATSPER3Q86XQ3 398 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 CAPN6Q9Y6Q1 641 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 BCL9O00512 1426 aa17.54■□□□□ 0.4
SCAF1-201ENST00000360565 SYNJ2BP-COX16A0A087WUM0 186 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 KRT14P02533 472 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 PSMC5P62195 406 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 SUPT20HL1Q3ZLR7 823 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 CFAP57Q96MR6 1250 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 SEMA6BQ9H3T3 888 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 COX16Q9P0S2 106 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 ZHX2Q9Y6X8 837 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 A0A087X0T9 212 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 FAM228BP0C875 321 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 CYP11B2P19099 503 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 CENPPQ6IPU0 288 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 ANKS1AQ92625 1134 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 APOL6Q9BWW8 343 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 RTFDC1Q9BY42 306 aaPredicted RBP17.53■□□□□ 0.4
SCAF1-201ENST00000360565 STK33Q9BYT3 514 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 ATP6V0A4Q9HBG4 840 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 NOD1Q9Y239 953 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 CAPN9O14815 690 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 VEGFAP15692 232 aaPredicted RBP17.53■□□□□ 0.4
SCAF1-201ENST00000360565 CA4P22748 312 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 SLC8A1P32418 973 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 ABCD1P33897 745 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 PMS2P54278 862 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 E2F4Q16254 413 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 TRAPPC11Q7Z392 1133 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 FAM149B1Q96BN6 582 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 PPP1R16BQ96T49 567 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 TTI1O43156 1089 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 CYP26A1O43174 497 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 RXRBP28702 533 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 NAB2Q15742 525 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 GEN1Q17RS7 908 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 EAPPQ56P03 285 aaPredicted RBP17.53■□□□□ 0.4
SCAF1-201ENST00000360565 PPP1R2P3Q6NXS1 205 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 ERICH1Q86X53 443 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 MICAL1Q8TDZ2 1067 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 NSUN6Q8TEA1 469 aaKnown RBP17.53■□□□□ 0.4
SCAF1-201ENST00000360565 RNF25Q96BH1 459 aaPredicted RBP17.53■□□□□ 0.4
SCAF1-201ENST00000360565 DCPSQ96C86 337 aaKnown RBP17.53■□□□□ 0.4
SCAF1-201ENST00000360565 AGPAT1Q99943 283 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 POLLQ9UGP5 575 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 PITPNM2Q9BZ72 1349 aa17.53■□□□□ 0.4
SCAF1-201ENST00000360565 DCCP43146 1447 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 COL5A2P05997 1499 aaPredicted RBP17.52■□□□□ 0.4
SCAF1-201ENST00000360565 CLDN3O15551 220 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 CHRNA3P32297 505 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 PPP2R2AP63151 447 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 TBX2Q13207 712 aaPredicted RBP17.52■□□□□ 0.4
SCAF1-201ENST00000360565 CCDC137Q6PK04 289 aaKnown RBP17.52■□□□□ 0.4
SCAF1-201ENST00000360565 RAB3IPQ96QF0 476 aaPredicted RBP17.52■□□□□ 0.4
SCAF1-201ENST00000360565 APEX2Q9UBZ4 518 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 L1RE1Q9UN81 338 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 IFT172Q9UG01 1749 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 GMNCA6NCL1 334 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 MCF2LO15068 1137 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 SLC16A3O15427 465 aaKnown RBP17.52■□□□□ 0.4
SCAF1-201ENST00000360565 SLC35G2Q8TBE7 412 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 CCDC97Q96F63 343 aaPredicted RBP17.52■□□□□ 0.4
SCAF1-201ENST00000360565 MLXIPLQ9NP71 852 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 SCINQ9Y6U3 715 aa17.52■□□□□ 0.4
SCAF1-201ENST00000360565 C7orf31Q8N865 590 aa17.52■□□□□ 0.39
SCAF1-201ENST00000360565 FBXL13Q8NEE6 735 aa17.52■□□□□ 0.39
SCAF1-201ENST00000360565 RIMS1Q86UR5 1692 aaKnown RBP17.52■□□□□ 0.39
SCAF1-201ENST00000360565 SFNP31947 248 aa17.51■□□□□ 0.39
SCAF1-201ENST00000360565 MDM2Q00987 491 aaPredicted RBP17.51■□□□□ 0.39
SCAF1-201ENST00000360565 RINT1Q6NUQ1 792 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms