RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 PITPNM3Q9BZ71 974 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 PAIP2BQ9ULR5 123 aaKnown RBP13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 CPDO75976 1380 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 AFF2P51816 1311 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 NSUN2Q08J23 767 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 CUL1Q13616 776 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 RWDD4Q6NW29 188 aaKnown RBP13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 FAM49AQ9H0Q0 323 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 RAVER2Q9HCJ3 691 aaKnown RBP13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 DNAJC12Q9UKB3 198 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 DCTN3O75935 186 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 DEUP1Q05D60 604 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 ZNF211Q13398 564 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 SLC30A9Q6PML9 568 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 WDR19Q8NEZ3 1342 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 BNIP3LO60238 219 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 HSPA4LO95757 839 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 NFRKBQ6P4R8 1299 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 CATSPER4Q7RTX7 472 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 TTC1Q99614 292 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
CCDC144A-204ENST00000360524 CHD1O14646 1710 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 FBXW10Q5XX13 1052 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 NLRP14Q86W24 1093 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 SPATA17Q96L03 361 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 FGFR1OP2Q9NVK5 253 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 HACD3Q9P035 362 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 TTI1O43156 1089 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 ERICH1Q86X53 443 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 TEX2Q8IWB9 1127 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 CEP19Q96LK0 163 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 OLFM3Q96PB7 478 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 ZHX2Q9Y6X8 837 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 ABCB11O95342 1321 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 GMNCA6NCL1 334 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 GYG2O15488 501 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 WRNIP1Q96S55 665 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 MCF2P10911 925 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 TMPRSS15P98073 1019 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 OCRLQ01968 901 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 ATG16L1Q676U5 607 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 ANGPTL8Q6UXH0 198 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 ANAPC7Q9UJX3 599 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 TTC7AQ9ULT0 858 aaPredicted RBP13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 PRCPP42785 496 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 RAD23BP54727 409 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 TNFAIP2Q03169 654 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 PPP6R3Q5H9R7 873 aaPredicted RBP13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 SNRNP48Q6IEG0 339 aaKnown RBP13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 SYT2Q8N9I0 419 aaPredicted RBP13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 OR6B3Q8NGW1 331 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 TBC1D22BQ9NU19 505 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 TMEM260Q9NX78 707 aa13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 SCHIP1Q9P0W5 487 aaPredicted RBP13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 PPARGC1AQ9UBK2 798 aaKnown RBP13.03□□□□□ -0.32
CCDC144A-204ENST00000360524 RFX7Q2KHR2 1363 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 ATP5HO75947 161 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 KPNA2P52292 529 aaKnown RBP13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 MAGOHP61326 146 aaKnown RBP13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 GRM4Q14833 912 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 DHX40Q8IX18 779 aaKnown RBP13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 FBXL13Q8NEE6 735 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 MCPH1Q8NEM0 835 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 DCP1AQ9NPI6 582 aaPredicted RBP13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 WDR64B1ANS9 1081 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 GNAT1P11488 350 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 ZNF667Q5HYK9 610 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 SYNE4Q8N205 404 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 RAD54LQ92698 747 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 GCNAQ96QF7 691 aa13.02□□□□□ -0.32
CCDC144A-204ENST00000360524 RASA4BC9J798 803 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L10C9JJH3 530 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 RASA4O43374 803 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 RGS9BPQ6ZS82 235 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 CRLF3Q8IUI8 442 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 THNSL1Q8IYQ7 743 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 SEPT8Q92599 483 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 A2ML1A8K2U0 1454 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 RCAN1P53805 252 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 RFX8Q6ZV50 586 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 EPM2AIP1Q7L775 607 aaPredicted RBP13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 SFR1Q86XK3 245 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 SERPINI1Q99574 410 aa13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.02□□□□□ -0.33
CCDC144A-204ENST00000360524 RHOT2Q8IXI1 618 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms