RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 DDX42Q86XP3 938 aaKnown RBP eCLIP12.11□□□□□ -0.47
SSU72-202ENST00000359060 SH2D3CQ8N5H7 860 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 SLC35C1Q96A29 364 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 TAAR1Q96RJ0 339 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 KCTD10Q9H3F6 313 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 TBC1D22BQ9NU19 505 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 GABBR1Q9UBS5 961 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 ODF2LQ9ULJ1 636 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 DHX9Q08211 1270 aaKnown RBP12.1□□□□□ -0.47
SSU72-202ENST00000359060 PDCLQ13371 301 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 RUFY4Q6ZNE9 571 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 SAMD7Q7Z3H4 446 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
SSU72-202ENST00000359060 STK33Q9BYT3 514 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 APEX2Q9UBZ4 518 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 DAAM1Q9Y4D1 1078 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 SART1O43290 800 aaKnown RBP12.1□□□□□ -0.47
SSU72-202ENST00000359060 SLC26A4O43511 780 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 MYBL2P10244 700 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 COBLL1Q53SF7 1204 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 MICALCLQ6ZW33 695 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 DEFB132Q7Z7B7 95 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 E7EVH7 732 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 MAP2K7O14733 419 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 RAD51CO43502 376 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 TLR2O60603 784 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 KRT14P02533 472 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 HMGCS2P54868 508 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 ZNF720Q7Z2F6 126 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 CPLX4Q7Z7G2 160 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 OTUD6BQ8N6M0 293 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 SLC35G2Q8TBE7 412 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 NEK9Q8TD19 979 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 GLG1Q92896 1179 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 RASSF4Q9H2L5 321 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 SALL4Q9UJQ4 1053 aa12.1□□□□□ -0.47
SSU72-202ENST00000359060 HNRNPH3P31942 346 aaKnown RBP12.09□□□□□ -0.47
SSU72-202ENST00000359060 CXCL9Q07325 125 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 ALS2CLQ60I27 953 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 RIT2Q99578 217 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.09□□□□□ -0.47
SSU72-202ENST00000359060 CBWD1Q9BRT8 395 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 MRIQ9BWK5 157 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 HSPBP1Q9NZL4 362 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 GOLGA6L7A0A1B0GV03 622 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 GRID2IPA4D2P6 1211 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 EIF3DO15371 548 aaKnown RBP eCLIP12.09□□□□□ -0.47
SSU72-202ENST00000359060 CCND2P30279 289 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 RDXP35241 583 aaKnown RBP12.09□□□□□ -0.47
SSU72-202ENST00000359060 JAG1P78504 1218 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
SSU72-202ENST00000359060 RFFLQ8WZ73 363 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 SYNCQ9H7C4 482 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 AIPL1Q9NZN9 384 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 PLAAQ9Y263 795 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
SSU72-202ENST00000359060 YDJCA8MPS7 323 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 TISP43B9A030 160 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 DAPK3O43293 454 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 PSMC5P62195 406 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 FAM213AQ9BRX8 229 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 MYOZ2Q9NPC6 264 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 PLCB1Q9NQ66 1216 aa12.09□□□□□ -0.47
SSU72-202ENST00000359060 FOXN3O00409 490 aaPredicted RBP12.08□□□□□ -0.47
SSU72-202ENST00000359060 CYP26A1O43174 497 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 CIITAP33076 1130 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 SNX1Q13596 522 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 MTMR3Q13615 1198 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 ZCWPW2Q504Y3 356 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 HYIQ5T013 277 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 METTL13Q8N6R0 699 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 ATG4CQ96DT6 458 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 OSGEPQ9NPF4 335 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 OLFML3Q9NRN5 406 aa12.08□□□□□ -0.47
SSU72-202ENST00000359060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.08□□□□□ -0.47
SSU72-202ENST00000359060 RRP15Q9Y3B9 282 aaKnown RBP12.08□□□□□ -0.47
SSU72-202ENST00000359060 MYH10P35580 1976 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 NOP56O00567 594 aaKnown RBP12.08□□□□□ -0.48
SSU72-202ENST00000359060 WDR46O15213 610 aaKnown RBP12.08□□□□□ -0.48
SSU72-202ENST00000359060 GLI1P08151 1106 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 PRLRP16471 622 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
SSU72-202ENST00000359060 SNX24Q9Y343 169 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 CCDC188H7C350 402 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 BUB1BO60566 1050 aaPredicted RBP12.08□□□□□ -0.48
SSU72-202ENST00000359060 NOL4O94818 638 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 ICAM1P05362 532 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 COPB2P35606 906 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 KRT76Q01546 638 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 DGKZQ13574 1117 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 ALCAMQ13740 583 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 TKFCQ3LXA3 575 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms