RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SCFD1Q8WVM8 642 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 LRCH3Q96II8 777 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZNF830Q96NB3 372 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 ACCSQ96QU6 501 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 BAG1Q99933 345 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 RUSC1Q9BVN2 902 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 EDEM3Q9BZQ6 932 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 ST6GALNAC4Q9H4F1 302 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 KCND1Q9NSA2 647 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 GABBR1Q9UBS5 961 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 FRMD4BQ9Y2L6 1034 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 LUC7L2Q9Y383 392 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 DAAM1Q9Y4D1 1078 aa11.81□□□□□ -0.52
TRAPPC4-201ENST00000359005 NPHP3-ACAD11A0A0J9YXS1 232 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 GAS2O43903 313 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ATP9AO75110 1047 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 HIP1RO75146 1068 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ADAMTS4O75173 837 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 NR2F2P24468 414 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ITGB8P26012 769 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 RFC5P40937 340 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 DMP1Q13316 513 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ACVR2BQ13705 512 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 FIGNQ5HY92 759 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 CCSAPQ6IQ19 270 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 SWSAP1Q6NVH7 229 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 METTL7BQ6UX53 244 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ABHD15Q6UXT9 468 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 APTXQ7Z2E3 356 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZNF720Q7Z2F6 126 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 TMTC1Q8IUR5 882 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ARRDC4Q8NCT1 418 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 MORC4Q8TE76 937 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 SEPT1Q8WYJ6 367 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZFP91Q96JP5 570 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 CEP170P1Q96L14 293 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ERGIC2Q96RQ1 377 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 MKNK1Q9BUB5 465 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 NDST4Q9H3R1 872 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ATP6V0A4Q9HBG4 840 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 VTA1Q9NP79 307 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 PDGFCQ9NRA1 345 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 TBC1D7Q9P0N9 293 aa11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ARMCX3Q9UH62 379 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZHX1Q9UKY1 873 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAPPC4-201ENST00000359005 COL6A3P12111 3177 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 A0A1W2PQJ5 194 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 TRIM43BA6NCK2 446 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 ATG7O95352 703 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 IPO7O95373 1038 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 CCNE2O96020 404 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 RARBP10826 455 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 BMP8BP34820 402 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 PSMC2P35998 433 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 PBX1P40424 430 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 PMS1P54277 932 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 CETN1Q12798 172 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 TRIM60Q495X7 471 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZCWPW2Q504Y3 356 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 ARMCX2Q7L311 632 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 CYFIP1Q7L576 1253 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 IRF2BP1Q8IU81 584 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 NELFCDQ8IXH7 590 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 ZC3H3Q8IXZ2 948 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 KLHDC9Q8NEP7 349 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 SPIRE2Q8WWL2 714 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 SLC7A3Q8WY07 619 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 HPS3Q969F9 1004 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 TRIM43Q96BQ3 446 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 KCTD10Q9H3F6 313 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 KCNF1Q9H3M0 494 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 SEPT9Q9UHD8 586 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 ATP11BQ9Y2G3 1177 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 SYNGAP1Q96PV0 1343 aa11.79□□□□□ -0.52
TRAPPC4-201ENST00000359005 K7ENM7 598 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 KIAA0391O15091 583 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 USO1O60763 962 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 MFAP3LO75121 409 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 RGS20O76081 388 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 OATP04181 439 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 AKR1A1P14550 325 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 POLGP54098 1239 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 PRKCEQ02156 737 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 TLE2Q04725 743 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 LAMC2Q13753 1193 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 SNX17Q15036 470 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 FAM102BQ5T8I3 360 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 ARMCX5Q6P1M9 558 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 PLPPR4Q7Z2D5 763 aa11.78□□□□□ -0.52
TRAPPC4-201ENST00000359005 SLC9A9Q8IVB4 645 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms