RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 MLH1P40692 756 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 BTDP43251 543 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 VAV2P52735 878 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 MDM2Q00987 491 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 KIF23Q02241 960 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 RNASELQ05823 741 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 TMEM53Q6P2H8 277 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNF572Q7Z3I7 529 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 TRIM50Q86XT4 487 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 IFT81Q8WYA0 676 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 CCDC51Q96ER9 411 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 CLMNQ96JQ2 1002 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 RMDN2Q96LZ7 410 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 CSRNP1Q96S65 589 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 LLPHQ9BRT6 129 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 MCOLN1Q9GZU1 580 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 VCX3BQ9H321 246 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 VCX3AQ9NNX9 186 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNHIT6Q9NWK9 470 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNF180Q9UJW8 692 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 MYH2Q9UKX2 1941 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 HIP1RO75146 1068 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 GM2AP17900 193 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 PLCD1P51178 756 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 ITIH4Q14624 930 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 CLPPQ16740 277 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 GALNTL6Q49A17 601 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 TBC1D10BQ4KMP7 808 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 ANGEL2Q5VTE6 544 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 KLHL29Q96CT2 875 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 HAPLN3Q96S86 360 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 PPP1R12CQ9BZL4 782 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 DCP1AQ9NPI6 582 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 GDF3Q9NR23 364 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 SWAP70Q9UH65 585 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNF236Q9UL36 1845 aa10.07□□□□□ -0.8
SMARCAL1-202ENST00000358207 MANSC4A6NHS7 340 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 PEX11AO75192 247 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 TPBGLP0DKB5 382 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 HARSP12081 509 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZFXP17010 805 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 CALB2P22676 271 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 CACNA2D1P54289 1103 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 DHX9Q08211 1270 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 SPDYE2Q495Y8 402 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 ERMARDQ5T6L9 678 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 IQCEQ6IPM2 695 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 IRGCQ6NXR0 463 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 ARHGAP18Q8N392 663 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 WDR60Q8WVS4 1066 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 UTP4Q969X6 686 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 TRIM11Q96F44 468 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 NR1H4Q96RI1 486 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 TIPINQ9BVW5 301 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 CPVLQ9H3G5 476 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 SYNRGQ9UMZ2 1314 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 A0A0G2JMZ2 1700 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 KIF28PB7ZC32 967 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 MAGEB3O15480 346 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 GSTA2P09210 222 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 BCRP11274 1271 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 TRPC1P48995 793 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 ATP11AP98196 1134 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 ITIH3Q06033 890 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 ASRGL1Q7L266 308 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 MYOCDQ8IZQ8 938 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 DNAJC9Q8WXX5 260 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 LZICQ8WZA0 190 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 ABTB1Q969K4 478 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 RNPEPL1Q9HAU8 725 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 EPB41L5Q9HCM4 733 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 RBM12Q9NTZ6 932 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 RMND1Q9NWS8 449 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 CIDEBQ9UHD4 219 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 SCOCQ9UIL1 159 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 SNX12Q9UMY4 172 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 USH1CQ9Y6N9 552 aa10.06□□□□□ -0.8
SMARCAL1-202ENST00000358207 HTR3EA5X5Y0 456 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 GCOM1H8Y6P7 765 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 MYZAPP0CAP1 466 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 CXCR5P32302 372 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 SULT2A1Q06520 285 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNF844Q08AG5 666 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 UAP1Q16222 522 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 ANO1Q5XXA6 986 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 ZNF554Q86TJ5 538 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 ANKS4BQ8N8V4 417 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 USP33Q8TEY7 942 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 HIC2Q96JB3 615 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 PSMB7Q99436 277 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 ELAC2Q9BQ52 826 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 SPATA16Q9BXB7 569 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 NOVA2Q9UNW9 492 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 R3HDM2Q9Y2K5 976 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 HEY1Q9Y5J3 304 aa10.05□□□□□ -0.8
SMARCAL1-202ENST00000358207 BOLA2-SMG1P6H3BVE0 249 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms