RNA–Protein interactions for RNA: ENST00000356876.7

TNFRSF25-204, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-204ENST00000356876 NFIL3Q16649 462 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 HS2ST1Q7LGA3 356 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 SYCP3Q8IZU3 236 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 GOLGA5Q8TBA6 731 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 TRAPPC12Q8WVT3 735 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 SUGCTQ9HAC7 445 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 F2P00734 622 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 RPL13P26373 211 aaKnown RBP28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 CNGA1P29973 690 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 NAMPTP43490 491 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 COPB1P53618 953 aaKnown RBP28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 MAP2K1Q02750 393 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 RAET1EQ8TD07 263 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 PXYLP1Q8TE99 480 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 KCNN1Q92952 543 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 INTS13Q9NVM9 706 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 ARHGAP28Q9P2N2 729 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 TBX20Q9UMR3 447 aa28.4■■■□□ 2.14
TNFRSF25-204ENST00000356876 DENND3A2RUS2 1198 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 MAGEB2O15479 319 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 C22orf31O95567 290 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 GNA14O95837 355 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 HMGCRP04035 888 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 NR2F2P24468 414 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 MKRN4PQ13434 485 aaPredicted RBP28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 FSCN1Q16658 493 aaKnown RBP28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 SPC24Q8NBT2 197 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 RETREG2Q8NC44 543 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 KIFC3Q9BVG8 833 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 RTN4Q9NQC3 1192 aaKnown RBP28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 EXOC7Q9UPT5 735 aa28.39■■■□□ 2.13
TNFRSF25-204ENST00000356876 NR3C1P04150 777 aa28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 PRKAR2AP13861 404 aaKnown RBP28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 GJA9P57773 515 aa28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 SNRPFP62306 86 aaKnown RBP28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 MXD4Q14582 209 aaPredicted RBP28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 PRPF31Q8WWY3 499 aaKnown RBP28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 PSPC1Q8WXF1 523 aaKnown RBP28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 KAT2BQ92831 832 aa28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 TUBGCP2Q9BSJ2 902 aa28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 TAB2Q9NYJ8 693 aa28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 CGNQ9P2M7 1197 aaKnown RBP28.38■■■□□ 2.13
TNFRSF25-204ENST00000356876 ADGRA3Q8IWK6 1321 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 N4BP3O15049 544 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 HSPA6P17066 643 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 DNM2P50570 870 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 PRMT2P55345 433 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 IGBP1P78318 339 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 IRX5P78411 483 aaPredicted RBP28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 DRP2Q13474 957 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 EFCAB12Q6NXP0 572 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 MAP4K3Q8IVH8 894 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 LRRC71Q8N4P6 559 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 UPF3AQ9H1J1 476 aaKnown RBP28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 VPS16Q9H269 839 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 AGPAT3Q9NRZ7 376 aa28.37■■■□□ 2.13
TNFRSF25-204ENST00000356876 GOLGA6L6A8MZA4 724 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 CLIC2O15247 247 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 PTMAP06454 111 aaKnown RBP28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 RARBP10826 455 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 KLRC1P26715 233 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 MTIF2P46199 727 aaKnown RBP28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 BEX3Q00994 111 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 PPFIA1Q13136 1202 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 BEGAINQ9BUH8 593 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 IKZF4Q9H2S9 585 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 KPNA6O60684 536 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 TPM2P07951 284 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 MYL3P08590 195 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 MARSP56192 900 aaKnown RBP28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 NKX3-2P78367 333 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 GRIK4Q16099 956 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 MAP3K21Q5TCX8 1036 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 VSTM4Q8IW00 320 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 DEPTORQ8TB45 409 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 TMEM174Q8WUU8 243 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 SPC25Q9HBM1 224 aa28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 SUCLA2Q9P2R7 463 aaPredicted RBP28.36■■■□□ 2.13
TNFRSF25-204ENST00000356876 RRN3P2A6NIE6 340 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 LRRIQ4A6NIV6 560 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 C6orf222P0C671 652 aaPredicted RBP28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 LAMTOR4Q0VGL1 99 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 CAPSQ13938 189 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 MYBPC2Q14324 1141 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 KIAA0753Q2KHM9 967 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 SLC9A9Q8IVB4 645 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 METTL13Q8N6R0 699 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 DMAC2Q9NW81 257 aa28.35■■■□□ 2.13
TNFRSF25-204ENST00000356876 HAS3O00219 553 aa28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 ASAP2O43150 1006 aa28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 TEX33O43247 280 aa28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 PRKCSHP14314 528 aaPredicted RBP28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 CCND3P30281 292 aaPredicted RBP28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 MFSD10Q14728 455 aa28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 CCDC40Q4G0X9 1142 aa28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 MTHFD1LQ6UB35 978 aa28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 KATNAL1Q9BW62 490 aa28.34■■■□□ 2.13
TNFRSF25-204ENST00000356876 SLC16A3O15427 465 aaKnown RBP28.33■■■□□ 2.13
TNFRSF25-204ENST00000356876 PSEN2P49810 448 aa28.33■■■□□ 2.13
TNFRSF25-204ENST00000356876 C12orf56Q8IXR9 622 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms