RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 ERVK-5Q9HDB9 667 aa15.27■□□□□ 0.03
PGBD2-202ENST00000355360 TMOD2Q9NZR1 351 aa15.27■□□□□ 0.03
PGBD2-202ENST00000355360 BCCIPQ9P287 314 aaKnown RBP eCLIP15.27■□□□□ 0.03
PGBD2-202ENST00000355360 NENFQ9UMX5 172 aa15.27■□□□□ 0.03
PGBD2-202ENST00000355360 FRMD4BQ9Y2L6 1034 aa15.27■□□□□ 0.03
PGBD2-202ENST00000355360 FRMPD4Q14CM0 1322 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 EMSYQ7Z589 1322 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 SLC16A3O15427 465 aaKnown RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 RPS6KA5O75582 802 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 SEC24CP53992 1094 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 PPP3CAQ08209 521 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 PPFIA1Q13136 1202 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 UAP1Q16222 522 aaPredicted RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 PADI6Q6TGC4 694 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 SCFD2Q8WU76 684 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 MRIQ9BWK5 157 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 GOPCQ9HD26 462 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 TUFT1Q9NNX1 390 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 UBE2TQ9NPD8 197 aaPredicted RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 KCNH7Q9NS40 1196 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 CCPG1Q9ULG6 757 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 GOLGA8KD6RF30 607 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 PGRMC1O00264 195 aaKnown RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 OPA1O60313 960 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 SHOX2O60902 331 aaPredicted RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 VIL1P09327 827 aaKnown RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 ALAS1P13196 640 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 GAP43P17677 238 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 UGCGQ16739 394 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 GLE1Q53GS7 698 aaKnown RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 PLEKHO2Q8TD55 490 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 BTBD6Q96KE9 485 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 FZD1Q9UP38 647 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 TELO2Q9Y4R8 837 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 COL4A5P29400 1685 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 EIF2AK2P19525 551 aaKnown RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 NPEPPSP55786 919 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 PLA2G4FQ68DD2 849 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 SLC30A5Q8TAD4 765 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 GLG1Q92896 1179 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 POP1Q99575 1024 aaKnown RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 ZNF341Q9BYN7 854 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 RANBP17Q9H2T7 1088 aaKnown RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 TAF1DQ9H5J8 278 aaPredicted RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 VCPKMTQ9H867 229 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 RNF14Q9UBS8 474 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 USP20Q9Y2K6 914 aa15.26■□□□□ 0.03
PGBD2-202ENST00000355360 BZW2Q9Y6E2 419 aaKnown RBP15.26■□□□□ 0.03
PGBD2-202ENST00000355360 DCDC2CA8MYV0 355 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 HSD17B3P37058 310 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 SF3A3Q12874 501 aaKnown RBP eCLIP15.25■□□□□ 0.03
PGBD2-202ENST00000355360 BFSP1Q12934 665 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 UBAP2Q5T6F2 1119 aaKnown RBP15.25■□□□□ 0.03
PGBD2-202ENST00000355360 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 MIER3Q7Z3K6 550 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 VPS36Q86VN1 386 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 UBLCP1Q8WVY7 318 aaPredicted RBP15.25■□□□□ 0.03
PGBD2-202ENST00000355360 NACC1Q96RE7 527 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.25■□□□□ 0.03
PGBD2-202ENST00000355360 TEKT3Q9BXF9 490 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 RAVER2Q9HCJ3 691 aaKnown RBP15.25■□□□□ 0.03
PGBD2-202ENST00000355360 APEX2Q9UBZ4 518 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 STXBP5LQ9Y2K9 1186 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
PGBD2-202ENST00000355360 EGFRP00533 1210 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 FERP16591 822 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 TNFRSF8P28908 595 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 ALS2CLQ60I27 953 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 ALG3Q92685 438 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 ZHX2Q9Y6X8 837 aa15.25■□□□□ 0.03
PGBD2-202ENST00000355360 EIF3DO15371 548 aaKnown RBP eCLIP15.24■□□□□ 0.03
PGBD2-202ENST00000355360 EIF3HO15372 352 aaKnown RBP eCLIP15.24■□□□□ 0.03
PGBD2-202ENST00000355360 SLC16A4O15374 487 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
PGBD2-202ENST00000355360 HOXA7P31268 230 aaPredicted RBP15.24■□□□□ 0.03
PGBD2-202ENST00000355360 SP4Q02446 784 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 SAAL1Q96ER3 474 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 STK33Q9BYT3 514 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 RASSF4Q9H2L5 321 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 FBXL5Q9UKA1 691 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 ATP9AO75110 1047 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 TNFAIP3P21580 790 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 STYK1Q6J9G0 422 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 RSBN1LQ6PCB5 846 aaPredicted RBP15.24■□□□□ 0.03
PGBD2-202ENST00000355360 PHLDB2Q86SQ0 1253 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 CTNNBL1Q8WYA6 563 aaPredicted RBP15.24■□□□□ 0.03
PGBD2-202ENST00000355360 KRT35Q92764 455 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 CCDC127Q96BQ5 260 aa15.24■□□□□ 0.03
PGBD2-202ENST00000355360 HERC5Q9UII4 1024 aaKnown RBP15.24■□□□□ 0.03
PGBD2-202ENST00000355360 ZNF536O15090 1300 aa15.23■□□□□ 0.03
PGBD2-202ENST00000355360 MRPS9P82933 396 aaKnown RBP15.23■□□□□ 0.03
PGBD2-202ENST00000355360 ACTRT1Q8TDG2 376 aa15.23■□□□□ 0.03
PGBD2-202ENST00000355360 CHURC1Q8WUH1 139 aa15.23■□□□□ 0.03
PGBD2-202ENST00000355360 MXRA8Q9BRK3 442 aa15.23■□□□□ 0.03
PGBD2-202ENST00000355360 TOPORSQ9NS56 1045 aaPredicted RBP15.23■□□□□ 0.03
PGBD2-202ENST00000355360 DMAC2Q9NW81 257 aa15.23■□□□□ 0.03
PGBD2-202ENST00000355360 AMFRQ9UKV5 643 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 281.4 ms