RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 CA8P35219 290 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 TBC1D10BQ4KMP7 808 aaPredicted RBP13.39□□□□□ -0.27
COL6A3-203ENST00000353578 FAM26FQ5R3K3 315 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 ATL2Q8NHH9 583 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 PIGOQ8TEQ8 1089 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 S100ZQ8WXG8 99 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 FAM212AQ96EL1 285 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 FBXL5Q9UKA1 691 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 WDR37Q9Y2I8 494 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 PSMC2P35998 433 aaKnown RBP13.39□□□□□ -0.27
COL6A3-203ENST00000353578 RESP18Q5W5W9 173 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 EFL1Q7Z2Z2 1120 aaKnown RBP13.39□□□□□ -0.27
COL6A3-203ENST00000353578 ADGRL3Q9HAR2 1447 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 MAST3O60307 1309 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 LSM1O15116 133 aaKnown RBP13.39□□□□□ -0.27
COL6A3-203ENST00000353578 HLA-DPA1P20036 260 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 NFKBIAP25963 317 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 TOGARAM2Q6ZUX3 1019 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 TBK1Q9UHD2 729 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 E7EWF7 191 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 PUM3Q15397 648 aaKnown RBP13.39□□□□□ -0.27
COL6A3-203ENST00000353578 ADA2Q9NZK5 511 aa13.39□□□□□ -0.27
COL6A3-203ENST00000353578 SERPINH1P50454 418 aaKnown RBP13.38□□□□□ -0.27
COL6A3-203ENST00000353578 BLIDQ8IZY5 108 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 PHF21AQ96BD5 680 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 MAPK8IP1Q9UQF2 711 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 SNAPC5O75971 98 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 CALB1P05937 261 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 OCM2P0CE71 109 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 OCMP0CE72 109 aaPredicted RBP13.38□□□□□ -0.27
COL6A3-203ENST00000353578 IL1RL1Q01638 556 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 TRIP10Q15642 601 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 SLCO1A2P46721 670 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 KIF19Q2TAC6 998 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 SYMPKQ92797 1274 aaKnown RBP13.38□□□□□ -0.27
COL6A3-203ENST00000353578 TSSK1BQ9BXA7 367 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 FAM153AQ9UHL3 310 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 SLC26A4O43511 780 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 SUPT3HO75486 399 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 KYNUQ16719 465 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 RGS21Q2M5E4 152 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 SPDYCQ5MJ68 293 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 MAGEB6Q8N7X4 407 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 ZNF184Q99676 751 aaPredicted RBP13.38□□□□□ -0.27
COL6A3-203ENST00000353578 AZI2Q9H6S1 392 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 MAGEB5Q9BZ81 275 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 RXFP1Q9HBX9 757 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 ANGPT2O15123 496 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 NUP62P37198 522 aaPredicted RBP13.38□□□□□ -0.27
COL6A3-203ENST00000353578 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 MICALL2Q8IY33 904 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 SPATA4Q8NEY3 305 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 ENKURQ8TC29 256 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 TMEM51Q9NW97 253 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 MED26O95402 600 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 TAP1Q03518 808 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 TRIM67Q6ZTA4 783 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
COL6A3-203ENST00000353578 PSMC3IPQ9P2W1 217 aaPredicted RBP13.38□□□□□ -0.27
COL6A3-203ENST00000353578 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 KCNA2P16389 499 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 SCP2P22307 547 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 ADGRG1Q9Y653 693 aa13.38□□□□□ -0.27
COL6A3-203ENST00000353578 TNNI3KQ59H18 835 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 NYAP1Q6ZVC0 841 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 ELOA2Q8IYF1 753 aaPredicted RBP13.37□□□□□ -0.27
COL6A3-203ENST00000353578 TTC17Q96AE7 1141 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 FPGT-TNNI3KV9GXZ4 949 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 NOP56O00567 594 aaKnown RBP13.37□□□□□ -0.27
COL6A3-203ENST00000353578 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 TMEM206Q9H813 350 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 ARPP21Q9UBL0 812 aaPredicted RBP13.37□□□□□ -0.27
COL6A3-203ENST00000353578 GPAA1O43292 621 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 GPTP24298 496 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 DLG4P78352 724 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 XIAPP98170 497 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 KRT31Q15323 416 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 MPRIPQ6WCQ1 1025 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 PRR23CQ6ZRP0 262 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 CCNE1P24864 410 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 PPM1FP49593 454 aaPredicted RBP13.37□□□□□ -0.27
COL6A3-203ENST00000353578 RAB25P57735 213 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 MYCBPAPQ8TBZ2 947 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 FAR2Q96K12 515 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 PA2G4Q9UQ80 394 aaKnown RBP13.37□□□□□ -0.27
COL6A3-203ENST00000353578 DMPKQ09013 629 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 TMTC4Q5T4D3 741 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 NYXQ9GZU5 481 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 APPL1Q9UKG1 709 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 PRDM4Q9UKN5 801 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 NFIBO00712 420 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 CAND2O75155 1236 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 JAK1P23458 1154 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 ITGA1P56199 1179 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 SNX12Q9UMY4 172 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 MYOM2P54296 1465 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 CCDC166P0CW27 439 aa13.37□□□□□ -0.27
COL6A3-203ENST00000353578 SCRN3Q0VDG4 424 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms