RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DYNC1I2Q13409 638 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 CUL3Q13618 768 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 ZC3H3Q8IXZ2 948 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 KLHL23Q8NBE8 558 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 NEDD1Q8NHV4 660 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 HPS3Q969F9 1004 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 UTP4Q969X6 686 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 HES6Q96HZ4 224 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 PNMA5Q96PV4 448 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 PAIP2Q9BPZ3 127 aaKnown RBP11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 GANQ9H2C0 597 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 VCXQ9H320 206 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 TXLNGQ9NUQ3 528 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 FGFR1OP2Q9NVK5 253 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 NKX1-2Q9UD57 310 aaPredicted RBP11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 GGT7Q9UJ14 662 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 NENFQ9UMX5 172 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 DDX60LQ5H9U9 1706 aaKnown RBP11.15□□□□□ -0.63
CHRNA1-202ENST00000348749 KDM3AQ9Y4C1 1321 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 RASA1P20936 1047 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 RXRBP28702 533 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 RAD23BP54727 409 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 DHX34Q14147 1143 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 SLC29A2Q14542 456 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 TSNAXIP1Q2TAA8 658 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 HYIQ5T013 277 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 IRGCQ6NXR0 463 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 ZDHHC24Q6UX98 284 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 NT5DC3Q86UY8 548 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 AGGF1Q8N302 714 aaeCLIP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 ASAP3Q8TDY4 903 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 PIGOQ8TEQ8 1089 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 TMEM237Q96Q45 408 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 TRIM4Q9C037 500 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 INTUQ9ULD6 942 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 RPL26L1Q9UNX3 145 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 DAAM1Q9Y4D1 1078 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 TAF1P21675 1872 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 RPTORQ8N122 1335 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 IRS2Q9Y4H2 1338 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 C10orf71Q711Q0 1435 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 TCP11X1B4DZS4 312 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 MAP3K13O43283 966 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 LDHBP07195 334 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 GSTA2P09210 222 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 DR1Q01658 176 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 EVX2Q03828 476 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 ITPK1Q13572 414 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 AUHQ13825 339 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 CLUL1Q15846 466 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 TMEM154Q6P9G4 183 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 C16orf86Q6ZW13 317 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 DAAM2Q86T65 1068 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 TRIM59Q8IWR1 403 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 ATL2Q8NHH9 583 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 FAM81AQ8TBF8 368 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 FAM136AQ96C01 138 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 RBM41Q96IZ5 413 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 ROPN1BQ9BZX4 212 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 NT5C3AQ9H0P0 336 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 LRMDAQ9H2I8 198 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 GOLPH3Q9H4A6 298 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 ROPN1Q9HAT0 212 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 NAGPAQ9UK23 515 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 TRIM33Q9UPN9 1127 aa11.14□□□□□ -0.63
CHRNA1-202ENST00000348749 MROH7Q68CQ1 1323 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 RASGRF2O14827 1237 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 PTK2Q05397 1052 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 EDRF1Q3B7T1 1238 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 OR52E8Q6IFG1 317 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 IRF2BP2Q7Z5L9 587 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 SESTD1Q86VW0 696 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 DYDC1Q8WWB3 177 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 CKAP2Q8WWK9 683 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 DDX12PQ92771 950 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 INPP5DQ92835 1189 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 KIFAP3Q92845 792 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 GRAMD1AQ96CP6 724 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 NLRP3Q96P20 1036 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 NAP1L3Q99457 506 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 TRIM31Q9BZY9 425 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 CHCHD3Q9NX63 227 aaKnown RBP11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 PARP2Q9UGN5 583 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 ZMYND8Q9ULU4 1186 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 PLIN4Q96Q06 1357 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 NHSQ6T4R5 1651 aa11.13□□□□□ -0.63
CHRNA1-202ENST00000348749 CDK5RAP2Q96SN8 1893 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms