RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 GRB10Q13322 594 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 TFDP1Q14186 410 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 EPC2Q52LR7 807 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 CATSPER4Q7RTX7 472 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 SRGAP1Q7Z6B7 1085 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 TMEM192Q8IY95 271 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 CMTR2Q8IYT2 770 aaKnown RBP25.03■■□□□ 1.6
PBX1-201ENST00000340699 RNF149Q8NC42 400 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 ELAC1Q9H777 363 aaKnown RBP25.03■■□□□ 1.6
PBX1-201ENST00000340699 IFT122Q9HBG6 1241 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 TMEM161AQ9NX61 479 aa25.03■■□□□ 1.6
PBX1-201ENST00000340699 ARHGEF35A5YM69 484 aa25.02■■□□□ 1.6
PBX1-201ENST00000340699 POU3F3P20264 500 aaPredicted RBP25.02■■□□□ 1.6
PBX1-201ENST00000340699 SYT1P21579 422 aa25.02■■□□□ 1.6
PBX1-201ENST00000340699 MICALL1Q8N3F8 863 aa25.02■■□□□ 1.6
PBX1-201ENST00000340699 SLC17A8Q8NDX2 589 aa25.02■■□□□ 1.6
PBX1-201ENST00000340699 GDPD5Q8WTR4 605 aa25.02■■□□□ 1.6
PBX1-201ENST00000340699 KIAA1024Q9UPX6 916 aa25.02■■□□□ 1.6
PBX1-201ENST00000340699 BMP15O95972 392 aa25.01■■□□□ 1.59
PBX1-201ENST00000340699 PHKA2P46019 1235 aa25.01■■□□□ 1.59
PBX1-201ENST00000340699 CCDC85BQ15834 202 aaPredicted RBP25.01■■□□□ 1.59
PBX1-201ENST00000340699 IL17AQ16552 155 aa25.01■■□□□ 1.59
PBX1-201ENST00000340699 PAN2Q504Q3 1202 aaKnown RBP25.01■■□□□ 1.59
PBX1-201ENST00000340699 ARL6IP4Q66PJ3 421 aaKnown RBP25.01■■□□□ 1.59
PBX1-201ENST00000340699 MCPH1Q8NEM0 835 aa25.01■■□□□ 1.59
PBX1-201ENST00000340699 MTCH2Q9Y6C9 303 aa25.01■■□□□ 1.59
PBX1-201ENST00000340699 HOXA2O43364 376 aa25■■□□□ 1.59
PBX1-201ENST00000340699 HSP90AA1P07900 732 aaKnown RBP25■■□□□ 1.59
PBX1-201ENST00000340699 CTNNB1P35222 781 aa25■■□□□ 1.59
PBX1-201ENST00000340699 ARL2P36404 184 aa25■■□□□ 1.59
PBX1-201ENST00000340699 PADI6Q6TGC4 694 aa25■■□□□ 1.59
PBX1-201ENST00000340699 MAEAQ7L5Y9 396 aa25■■□□□ 1.59
PBX1-201ENST00000340699 POLR3FQ9H1D9 316 aaPredicted RBP25■■□□□ 1.59
PBX1-201ENST00000340699 DDX19AQ9NUU7 478 aaKnown RBP25■■□□□ 1.59
PBX1-201ENST00000340699 LMCD1Q9NZU5 365 aa25■■□□□ 1.59
PBX1-201ENST00000340699 PIN4Q9Y237 131 aaKnown RBP25■■□□□ 1.59
PBX1-201ENST00000340699 VWA3AA6NCI4 1184 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 LPXNO60711 386 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 RB1P06400 928 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 BMPR1AP36894 532 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 POU5F1BQ06416 359 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 ECM1Q16610 540 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 FAM102BQ5T8I3 360 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 TWF2Q6IBS0 349 aaKnown RBP24.99■■□□□ 1.59
PBX1-201ENST00000340699 ECHDC2Q86YB7 292 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 CLP1Q92989 425 aaKnown RBP24.99■■□□□ 1.59
PBX1-201ENST00000340699 DNM3Q9UQ16 869 aa24.99■■□□□ 1.59
PBX1-201ENST00000340699 NLRC5Q86WI3 1866 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 A0A0U1RQF3 1178 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 TBKBP1A7MCY6 615 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 PP2D1A8MPX8 630 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 H3BNC9 293 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 SKIP12755 728 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 CDC25AP30304 524 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 GATMP50440 423 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 PTENP60484 403 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 GPM6BQ13491 265 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 RNF169Q8NCN4 708 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 ASAP3Q8TDY4 903 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 BHMT2Q9H2M3 363 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 RALGAPA2Q2PPJ7 1873 aa24.98■■□□□ 1.59
PBX1-201ENST00000340699 ERLIN2O94905 339 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 EOMESO95936 686 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 CYP11B2P19099 503 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 GLRA2P23416 452 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 NCBP1Q09161 790 aaKnown RBP24.97■■□□□ 1.59
PBX1-201ENST00000340699 PCBP1Q15365 356 aaKnown RBP eCLIP24.97■■□□□ 1.59
PBX1-201ENST00000340699 SF3A1Q15459 793 aaKnown RBP24.97■■□□□ 1.59
PBX1-201ENST00000340699 ZRSR1Q15695 479 aaKnown RBP24.97■■□□□ 1.59
PBX1-201ENST00000340699 PTPROQ16827 1216 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 SPOUT1Q5T280 376 aaKnown RBP24.97■■□□□ 1.59
PBX1-201ENST00000340699 ABI1Q8IZP0 508 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 C11orf84Q9BUA3 381 aaPredicted RBP24.97■■□□□ 1.59
PBX1-201ENST00000340699 MINDY3Q9H8M7 445 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 AGPAT5Q9NUQ2 364 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 MRPL42Q9Y6G3 142 aaKnown RBP24.97■■□□□ 1.59
PBX1-201ENST00000340699 CDH23Q9H251 3354 aa24.97■■□□□ 1.59
PBX1-201ENST00000340699 COL4A4P53420 1690 aaPredicted RBP24.97■■□□□ 1.59
PBX1-201ENST00000340699 INO80B-WBP1J3KQ70 363 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 STX6O43752 255 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 FGFR1P11362 822 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 CAPSQ13938 189 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 CDK5RAP3Q96JB5 506 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 TRAIPQ9BWF2 469 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 PLVAPQ9BX97 442 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 TMEM117Q9H0C3 514 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 GPRC5CQ9NQ84 441 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 CHD7Q9P2D1 2997 aa24.96■■□□□ 1.59
PBX1-201ENST00000340699 C5orf67F2Z3F1 127 aa24.95■■□□□ 1.58
PBX1-201ENST00000340699 EYA4O95677 639 aa24.95■■□□□ 1.58
PBX1-201ENST00000340699 RAB27AP51159 221 aa24.95■■□□□ 1.58
PBX1-201ENST00000340699 RESTQ13127 1097 aa24.95■■□□□ 1.58
PBX1-201ENST00000340699 IFNLR1Q8IU57 520 aaPredicted RBP24.95■■□□□ 1.58
PBX1-201ENST00000340699 AK8Q96MA6 479 aa24.95■■□□□ 1.58
PBX1-201ENST00000340699 MMTAG2Q9BU76 263 aaKnown RBP24.95■■□□□ 1.58
PBX1-201ENST00000340699 NT5C3AQ9H0P0 336 aa24.95■■□□□ 1.58
PBX1-201ENST00000340699 ZSCAN16Q9H4T2 348 aaPredicted RBP24.95■■□□□ 1.58
PBX1-201ENST00000340699 AAASQ9NRG9 546 aa24.95■■□□□ 1.58
PBX1-201ENST00000340699 MTMR6Q9Y217 621 aa24.95■■□□□ 1.58
PBX1-201ENST00000340699 COL6A3P12111 3177 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms