RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 ECE2O60344 883 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 EYA4O95677 639 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 ATF2P15336 505 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 SHMT1P34896 483 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 PRELPP51888 382 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 SNCBQ16143 134 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 PTGISQ16647 500 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 ZNF668Q96K58 619 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 HAUS2Q9NVX0 235 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 KRT19P08727 400 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 NSFP46459 744 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 LIG4P49917 911 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 DMP1Q13316 513 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 ORC2Q13416 577 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 TMED2Q15363 201 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 EDRF1Q3B7T1 1238 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 MCTP2Q6DN12 878 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 RINT1Q6NUQ1 792 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 PPP1R18Q6NYC8 613 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 AMIGO3Q86WK7 504 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 ACCSQ96QU6 501 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 RAVER2Q9HCJ3 691 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 CNOT8Q9UFF9 292 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 EXOC7Q9UPT5 735 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 ALG6Q9Y672 507 aa11.94□□□□□ -0.5
SEMA4D-201ENST00000339861 TMEM150BA6NC51 233 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 AGPSO00116 658 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 EML1O00423 815 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 PPP1R11O60927 126 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 AARSP49588 968 aaKnown RBP eCLIP11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 VAMP7P51809 220 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 CCDC6Q16204 474 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 FMNL3Q8IVF7 1028 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 MYCBPAPQ8TBZ2 947 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 SLC20A1Q8WUM9 679 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 C18orf8Q96DM3 657 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 CYFIP2Q96F07 1278 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 WDR11Q9BZH6 1224 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 TTYH3Q9C0H2 523 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 GINS2Q9Y248 185 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 CD58P19256 250 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 MFAP3P55082 362 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 SETDB1Q15047 1291 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 LONRF1Q17RB8 773 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 NLGN1Q8N2Q7 840 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 ZNF341Q9BYN7 854 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 ISCUQ9H1K1 167 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 CD248Q9HCU0 757 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 GPRC5CQ9NQ84 441 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 KMT5AQ9NQR1 393 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 SEPT9Q9UHD8 586 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 CLDN3O15551 220 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 ZNF131P52739 623 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 GPC5P78333 572 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 STRN3Q13033 797 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 SEMA3FQ13275 785 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 SLC29A2Q14542 456 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 LIN9Q5TKA1 542 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 SRRM1Q8IYB3 904 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 PI4K2AQ9BTU6 479 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 QTRT2Q9H974 415 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 PPP1R9AQ9ULJ8 1098 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
SEMA4D-201ENST00000339861 ATP2A1O14983 1001 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 CHN1P15882 459 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 HNRNPH1P31943 449 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 NPEPPSP55786 919 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 CEP55Q53EZ4 464 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 RC3H1Q5TC82 1133 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 SYT2Q8N9I0 419 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 XXYLT1Q8NBI6 393 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 ZNF564Q8TBZ8 553 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 HVCN1Q96D96 273 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 PRMT1Q99873 361 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 AGPAT1Q99943 283 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 PARP2Q9UGN5 583 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 GOLGA8SH3BPF8 625 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 GOLGA8MH3BSY2 632 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 GYS1P13807 737 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 PRLRP16471 622 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 MTERF2Q49AM1 385 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 PLA2G4FQ68DD2 849 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 TRIM68Q6AZZ1 485 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 FBXO25Q8TCJ0 367 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 FAM84AQ96KN4 292 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 APEX2Q9UBZ4 518 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 CALCAP01258 141 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 COMTP21964 271 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 OSTNP61366 133 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 LACTBP83111 547 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 TMEM119Q4V9L6 283 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 EEPD1Q7L9B9 569 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms