RNA–Protein interactions for RNA: ENST00000323434.12

RPH3AL-201, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 1 (best) BASIC

Gene RPH3AL, Length 2,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-201ENST00000323434 TRIM49P0CI25 452 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 TRIM49CP0CI26 452 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 FLT3P36888 993 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 EIF1ADQ8N9N8 165 aaKnown RBP16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 ACTRT1Q8TDG2 376 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 CABS1Q96KC9 395 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 NACC1Q96RE7 527 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 LXNQ9BS40 222 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 PPANQ9NQ55 473 aaKnown RBP16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 SLC12A6Q9UHW9 1150 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 BZW2Q9Y6E2 419 aaKnown RBP16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 CNTNAP1P78357 1384 aa16.59■□□□□ 0.25
RPH3AL-201ENST00000323434 H0YHG0 523 aa16.58■□□□□ 0.25
RPH3AL-201ENST00000323434 CEP104O60308 925 aa16.58■□□□□ 0.25
RPH3AL-201ENST00000323434 IFT88Q13099 833 aa16.58■□□□□ 0.25
RPH3AL-201ENST00000323434 HS2ST1Q7LGA3 356 aa16.58■□□□□ 0.25
RPH3AL-201ENST00000323434 ZNF720Q7Z2F6 126 aa16.58■□□□□ 0.25
RPH3AL-201ENST00000323434 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.58■□□□□ 0.257e-9■■■■■ 72.6
RPH3AL-201ENST00000323434 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.25
RPH3AL-201ENST00000323434 BCS1LQ9Y276 419 aa16.58■□□□□ 0.25
RPH3AL-201ENST00000323434 SRRM3A6NNA2 597 aaPredicted RBP16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 TMCO5BA8MYB1 307 aa16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 FLOT1O75955 427 aa16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 CUL1Q13616 776 aa16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 RNF187Q5TA31 235 aaPredicted RBP16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 U2AF1L4Q8WU68 220 aaKnown RBP16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 CYFIP2Q96F07 1278 aa16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 PBKQ96KB5 322 aa16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 SH2D3AQ9BRG2 576 aa16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 EHMT1Q9H9B1 1298 aa16.58■□□□□ 0.24
RPH3AL-201ENST00000323434 MYZAPP0CAP1 466 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 ACTN3Q08043 901 aaPredicted RBP16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 SYCP3Q8IZU3 236 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 CPXCR1Q8N123 301 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 METTL13Q8N6R0 699 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 TEKT3Q9BXF9 490 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 DDX47Q9H0S4 455 aaKnown RBP16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 HOMER2Q9NSB8 354 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 GGA2Q9UJY4 613 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 CCPG1Q9ULG6 757 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 NOC2LQ9Y3T9 749 aaKnown RBP16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 ARHGEF35A5YM69 484 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 EIF3DO15371 548 aaKnown RBP eCLIP16.57■□□□□ 0.241e-6■■■■□ 23.4
RPH3AL-201ENST00000323434 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 USP8P40818 1118 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 SPDYE2Q495Y8 402 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 BORCS6Q96GS4 357 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 FIZ1Q96SL8 496 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 FRMD4BQ9Y2L6 1034 aa16.57■□□□□ 0.24
RPH3AL-201ENST00000323434 GOLGA6L10A6NI86 522 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 ITGA4P13612 1032 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 TMOD1P28289 359 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 CTNNA1P35221 906 aaKnown RBP16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 GSCP56915 257 aaPredicted RBP16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 SLC15A2Q16348 729 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 CBWD6Q4V339 395 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 CBWD3Q5JTY5 395 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 CBWD5Q5RIA9 395 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 VPS36Q86VN1 386 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 TPCN2Q8NHX9 752 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 WDR11Q9BZH6 1224 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 LRRC4CQ9HCJ2 640 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 AGPAT3Q9NRZ7 376 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 CNOT8Q9UFF9 292 aaKnown RBP16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 SRCAPQ6ZRS2 3230 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 FRMPD4Q14CM0 1322 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 HIP1RO75146 1068 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 ITGB5P18084 799 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 CAP2P40123 477 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 FMO5P49326 533 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 JAM2P57087 298 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 DGKZQ13574 1117 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 QPCTQ16769 361 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 CCDC13Q8IYE1 715 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 ZNF341Q9BYN7 854 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 FBXL5Q9UKA1 691 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 NENFQ9UMX5 172 aa16.56■□□□□ 0.24
RPH3AL-201ENST00000323434 PGRMC1O00264 195 aaKnown RBP16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 DDX3XO00571 662 aaKnown RBP eCLIP16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 NFIBO00712 420 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 EVI5O60447 810 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 EXOC3O60645 756 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 SPRED3Q2MJR0 410 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 C10orf76Q5T2E6 689 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 CCDC91Q7Z6B0 441 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 TTLL6Q8N841 843 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.247e-11■□□□□ 8.4
RPH3AL-201ENST00000323434 PCIF1Q9H4Z3 704 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 COL20A1Q9P218 1284 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 DDX20Q9UHI6 824 aaKnown RBP16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 DNAJC12Q9UKB3 198 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 ZNF646O15015 1829 aaPredicted RBP16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 H2AFZP0C0S5 128 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 PRKCIP41743 596 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 STAT1P42224 750 aa16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 EN1Q05925 392 aaPredicted RBP16.55■□□□□ 0.24
RPH3AL-201ENST00000323434 ARHGAP44Q17R89 818 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms