RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ARHGEF26Q96DR7 871 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 PGM2Q96G03 612 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 DDX23Q9BUQ8 820 aaKnown RBP10.44□□□□□ -0.74
PTPRA-202ENST00000318266 TXLNGYQ9BZA5 131 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 KCTD10Q9H3F6 313 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 BATF3Q9NR55 127 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 TAS2R14Q9NYV8 317 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 TBK1Q9UHD2 729 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 DDX25Q9UHL0 483 aaKnown RBP10.44□□□□□ -0.74
PTPRA-202ENST00000318266 PCDHA12Q9UN75 941 aa10.44□□□□□ -0.74
PTPRA-202ENST00000318266 TMEM120BA0PK00 339 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 BHMG1C9JSJ3 638 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 KIAA0391O15091 583 aaKnown RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 SMNDC1O75940 238 aaKnown RBP eCLIP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 AKAP3O75969 853 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ATP2A2P16615 1042 aaKnown RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ABL2P42684 1182 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ADCY7P51828 1080 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 RIPK1Q13546 671 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 DDB1Q16531 1140 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 C10orf76Q5T2E6 689 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 POTEGQ6S5H5 508 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 POTEEQ6S8J3 1075 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 LRRC47Q8N1G4 583 aaKnown RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 FITM2Q8N6M3 262 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 LNX1Q8TBB1 728 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ACSBG1Q96GR2 724 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 RMDN2Q96LZ7 410 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 EYA3Q99504 573 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■■■■■ 71
PTPRA-202ENST00000318266 ANKRD63C9JTQ0 380 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 H0Y3Z8 333 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 NUDT17P0C025 328 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 RASA1P20936 1047 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 LACTBP83111 547 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 KCNA1Q09470 495 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 PABPC4Q13310 644 aaKnown RBP eCLIP10.43□□□□□ -0.743e-13■■■■■ 32.1
PTPRA-202ENST00000318266 SNX1Q13596 522 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 GRIK5Q16478 980 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 TMEM119Q4V9L6 283 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 FAM47EQ6ZV65 393 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 PALB2Q86YC2 1186 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 CCHCR1Q8TD31 782 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 CTNNBL1Q8WYA6 563 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 SEC14L1Q92503 715 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 POP1Q99575 1024 aaKnown RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 PAIP2Q9BPZ3 127 aaKnown RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 OSBPL1AQ9BXW6 950 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 THAP2Q9H0W7 228 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 KCNMB3Q9NPA1 279 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ADAM22Q9P0K1 906 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ZMYND8Q9ULU4 1186 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 BTNL10A8MVZ5 291 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 LRRN2O75325 713 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 SUN1O94901 812 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 INHBEP58166 350 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ATP11AP98196 1134 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 MAPK7Q13164 816 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 AUHQ13825 339 aaKnown RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ARHGAP44Q17R89 818 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 SLFN11Q7Z7L1 901 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 EXOC3L1Q86VI1 746 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 KRT35Q92764 455 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 HAS1Q92839 578 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ARHGEF2Q92974 986 aaKnown RBP10.43□□□□□ -0.74
PTPRA-202ENST00000318266 CEP95Q96GE4 821 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 SPZ1Q9BXG8 430 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 LRRC27Q9C0I9 530 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 ETNK1Q9HBU6 452 aa10.43□□□□□ -0.74
PTPRA-202ENST00000318266 BTAF1O14981 1849 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 SFI1A8K8P3 1242 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 DDX3YO15523 660 aaKnown RBP10.42□□□□□ -0.74
PTPRA-202ENST00000318266 AGTP01019 485 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 CCND1P24385 295 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 CRKLP46109 303 aaKnown RBP10.42□□□□□ -0.74
PTPRA-202ENST00000318266 C6orf118Q5T5N4 469 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 AP1ARQ63HQ0 302 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 CDCA2Q69YH5 1023 aaPredicted RBP10.42□□□□□ -0.74
PTPRA-202ENST00000318266 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 EGFL6Q8IUX8 553 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 TMEM237Q96Q45 408 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 SYT17Q9BSW7 474 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 GRHL1Q9NZI5 618 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 NKX1-2Q9UD57 310 aaPredicted RBP10.42□□□□□ -0.74
PTPRA-202ENST00000318266 BZW2Q9Y6E2 419 aaKnown RBP10.42□□□□□ -0.74
PTPRA-202ENST00000318266 TCRBV7S2A1N4TA0A589 114 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 CYP11B2P19099 503 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 RFC4P35249 363 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 ADCY2Q08462 1091 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 TTC27Q6P3X3 843 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 SFR1Q86XK3 245 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 CCDC105Q8IYK2 499 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 MTRF1LQ9UGC7 380 aaKnown RBP10.42□□□□□ -0.74
PTPRA-202ENST00000318266 RASAL2Q9UJF2 1139 aa10.42□□□□□ -0.74
PTPRA-202ENST00000318266 RSPH10B2B2RC85 870 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 RIPK2O43353 540 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 CAMTA2O94983 1202 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 RSPH10BP0C881 870 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms