RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 TXNDC9O14530 226 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 SH3BGRP55822 239 aaPredicted RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 COPS2P61201 443 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 KRT31Q15323 416 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAM47AQ5JRC9 791 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 SH3BP5LQ7L8J4 393 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 SPATA17Q96L03 361 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 BRD8Q9H0E9 1235 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 DEFB129Q9H1M3 183 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 CNOT10Q9H9A5 744 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 TMBIM4Q9HC24 238 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 STOML1Q9UBI4 398 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 ANO9A1A5B4 782 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 IFIT3O14879 490 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 TSPY3P0CV98 308 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 TSPY8P0CW00 308 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 PDIA3P30101 505 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 PDE6CP51160 858 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 LMBRD2Q68DH5 695 aaPredicted RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 CCDC174Q6PII3 467 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 MICU3Q86XE3 530 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZSWIM5Q9P217 1185 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 R3HDM2Q9Y2K5 976 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 TACC3Q9Y6A5 838 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 CNTNAP1P78357 1384 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAM196BA6NMK8 535 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 GSTA2P09210 222 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 BPIFB4P59827 614 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 MTMR3Q13615 1198 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 HAUS3Q68CZ6 603 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 SULF1Q8IWU6 871 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZKSCAN3Q9BRR0 538 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 PAGR1Q9BTK6 254 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 METTL5Q9NRN9 209 aaKnown RBP12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 ADD3Q9UEY8 706 aaKnown RBP12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 TMCO1Q9UM00 188 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 UTRNP46939 3433 aa12.58□□□□□ -0.39
LDLRAD3-201ENST00000315571 KCNJ18B7U540 433 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 ERCC5P28715 1186 aaPredicted RBP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 TFAP4Q01664 338 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 DMPKQ09013 629 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 KCNJ12Q14500 433 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 TMEM67Q5HYA8 995 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 CYB5R4Q7L1T6 521 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 SPATA24Q86W54 205 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 DDX42Q86XP3 938 aaKnown RBP eCLIP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 LUC7LQ9NQ29 371 aaKnown RBP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 FBXL5Q9UKA1 691 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 ATRNL1Q5VV63 1379 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 TRIM43BA6NCK2 446 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 ATP9AO75110 1047 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 TROVE2P10155 538 aaKnown RBP eCLIP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 ZNF268Q14587 947 aaPredicted RBP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 IQCKQ8N0W5 287 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 UCMAQ8WVF2 138 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 AIFM3Q96NN9 605 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 NHEJ1Q9H9Q4 299 aaPredicted RBP12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 ADAM22Q9P0K1 906 aa12.58□□□□□ -0.4
LDLRAD3-201ENST00000315571 BAG2O95816 211 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 FGRP09769 529 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 ATP6V1C1P21283 382 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 NT5C2P49902 561 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 PEX5P50542 639 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 EXOSC10Q01780 885 aaKnown RBP12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 PRPF31Q8WWY3 499 aaKnown RBP12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 CAVIN3Q969G5 261 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 TMEM87BQ96K49 555 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 NDUFB5O43674 189 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 SHBGP04278 402 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 HSD17B3P37058 310 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 PSMD7P51665 324 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 ANTXR2P58335 489 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 EHHADHQ08426 723 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 COL2A1P02458 1487 aaPredicted RBP12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 WDR19Q8NEZ3 1342 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 RASA1P20936 1047 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 RASSF2P50749 326 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 CLCN2P51788 898 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 ARID5AQ03989 594 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 GABPAQ06546 454 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 MIGA2Q7L4E1 593 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 ABHD8Q96I13 439 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 RMND1Q9NWS8 449 aa12.57□□□□□ -0.4
LDLRAD3-201ENST00000315571 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
LDLRAD3-201ENST00000315571 FTCDO95954 541 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms