RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ADAM22Q9P0K1 906 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 DNAJC12Q9UKB3 198 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 KNOP1Q1ED39 458 aaKnown RBP14.49□□□□□ -0.09
RFFL-201ENST00000315249 NPHP3-ACAD11A0A0J9YXS1 232 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 LCP1P13796 627 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 THPOP40225 353 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 TCP11X2Q5H9J9 407 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 RESP18Q5W5W9 173 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 SCFD2Q8WU76 684 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 ZBED1O96006 694 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 GUCY1A2P33402 732 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 TRIP13Q15645 432 aaPredicted RBP14.48□□□□□ -0.09
RFFL-201ENST00000315249 LMBRD2Q68DH5 695 aaPredicted RBP14.48□□□□□ -0.09
RFFL-201ENST00000315249 SPTLC3Q9NUV7 552 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 TRIM49BA6NDI0 452 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 FTCDO95954 541 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 EIF4A3P38919 411 aaKnown RBP14.48□□□□□ -0.09
RFFL-201ENST00000315249 CXCL9Q07325 125 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 EFCAB12Q6NXP0 572 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 TOGARAM2Q6ZUX3 1019 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 NUDT18Q6ZVK8 323 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 HEY1Q9Y5J3 304 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 CYP2C9P11712 490 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 DDX53Q86TM3 631 aaKnown RBP14.48□□□□□ -0.09
RFFL-201ENST00000315249 LRRC71Q8N4P6 559 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 N4BP2L2Q92802 583 aaPredicted RBP14.48□□□□□ -0.09
RFFL-201ENST00000315249 GLIS2Q9BZE0 524 aaPredicted RBP14.48□□□□□ -0.09
RFFL-201ENST00000315249 NYAP2Q9P242 653 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 PGK2P07205 417 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 RAB44Q7Z6P3 723 aaPredicted RBP14.48□□□□□ -0.09
RFFL-201ENST00000315249 CFAP36Q96G28 342 aa14.48□□□□□ -0.09
RFFL-201ENST00000315249 POLRMTO00411 1230 aaKnown RBP14.47□□□□□ -0.09
RFFL-201ENST00000315249 MOCS3O95396 460 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 ADCY1Q08828 1119 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 MXD4Q14582 209 aaPredicted RBP14.47□□□□□ -0.09
RFFL-201ENST00000315249 VSIG1Q86XK7 387 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 IFT43Q96FT9 208 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 EPHA7Q15375 998 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 ANKRD20A3Q5VUR7 823 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 RPUSD2Q8IZ73 545 aaKnown RBP14.47□□□□□ -0.09
RFFL-201ENST00000315249 CHST13Q8NET6 341 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 GLB1LQ6UWU2 654 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 NHEJ1Q9H9Q4 299 aaPredicted RBP14.47□□□□□ -0.09
RFFL-201ENST00000315249 DYRK4Q9NR20 520 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 PLEKHH3Q7Z736 793 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 TMEM35BQ8NCS4 154 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 MCUR1Q96AQ8 359 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 ERAP1Q9NZ08 941 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 ANAPC7Q9UJX3 599 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 ACOT2P49753 483 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 DCAF4L1Q3SXM0 396 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 PLA2G4FQ68DD2 849 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 CYP4F22Q6NT55 531 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 BBOF1Q8ND07 529 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 F5H423 210 aaPredicted RBP14.47□□□□□ -0.09
RFFL-201ENST00000315249 RALAP11233 206 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 ITGA4P13612 1032 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 RASA1P20936 1047 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 GNA15P30679 374 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 EFNA5P52803 228 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 SBK1Q52WX2 424 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 XKR3Q5GH77 459 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 GPD1LQ8N335 351 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 EFCC1Q9HA90 598 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 FIS1Q9Y3D6 152 aa14.47□□□□□ -0.09
RFFL-201ENST00000315249 DCDC2CA8MYV0 355 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 GUCY2DQ02846 1103 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 BTBD8Q5XKL5 378 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 HAUS6Q7Z4H7 955 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 ATP11BQ9Y2G3 1177 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 RBBP5Q15291 538 aaKnown RBP14.46□□□□□ -0.09
RFFL-201ENST00000315249 PAN2Q504Q3 1202 aaKnown RBP14.46□□□□□ -0.09
RFFL-201ENST00000315249 ZNF560Q96MR9 790 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 SYNDIG1Q9H7V2 258 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 SEL1LQ9UBV2 794 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 PRCPP42785 496 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 CUL4AQ13619 759 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 SEPT5Q99719 369 aaPredicted RBP14.46□□□□□ -0.09
RFFL-201ENST00000315249 FSD1LQ9BXM9 530 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 KLHL8Q9P2G9 620 aaPredicted RBP14.46□□□□□ -0.09
RFFL-201ENST00000315249 POLR1AO95602 1720 aaPredicted RBP14.46□□□□□ -0.09
RFFL-201ENST00000315249 WDR19Q8NEZ3 1342 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 CAP2P40123 477 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 CDC42EP1Q00587 391 aa14.46□□□□□ -0.09
RFFL-201ENST00000315249 GPR75-ASB3A0A0A6YYF3 556 aa14.46□□□□□ -0.1
RFFL-201ENST00000315249 NDUFAB1O14561 156 aa14.46□□□□□ -0.1
RFFL-201ENST00000315249 CASP2P42575 452 aa14.46□□□□□ -0.1
RFFL-201ENST00000315249 MNAT1P51948 309 aa14.46□□□□□ -0.1
RFFL-201ENST00000315249 KCNH2Q12809 1159 aa14.46□□□□□ -0.1
RFFL-201ENST00000315249 C10orf76Q5T2E6 689 aa14.46□□□□□ -0.1
RFFL-201ENST00000315249 SPZ1Q9BXG8 430 aa14.46□□□□□ -0.1
RFFL-201ENST00000315249 ADAMTS1Q9UHI8 967 aa14.46□□□□□ -0.1
RFFL-201ENST00000315249 BZW1Q7L1Q6 419 aaKnown RBP14.45□□□□□ -0.1
RFFL-201ENST00000315249 CDC26Q8NHZ8 85 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 KIF20BQ96Q89 1820 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 KIAA1755Q5JYT7 1200 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 ACER1Q8TDN7 264 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 ADM5C9JUS6 153 aa14.45□□□□□ -0.1
RFFL-201ENST00000315249 F8W8V4 182 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms