RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 YWHABP31946 246 aaKnown RBP12.55□□□□□ -0.4
PTPN2-201ENST00000309660 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
PTPN2-201ENST00000309660 UGCGQ16739 394 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 DDX42Q86XP3 938 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPN2-201ENST00000309660 PALB2Q86YC2 1186 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 TPCN2Q8NHX9 752 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 LNX1Q8TBB1 728 aaPredicted RBP12.55□□□□□ -0.4
PTPN2-201ENST00000309660 SYTL5Q8TDW5 730 aaPredicted RBP12.55□□□□□ -0.4
PTPN2-201ENST00000309660 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 INPP4AQ96PE3 977 aaPredicted RBP12.55□□□□□ -0.4
PTPN2-201ENST00000309660 TAS2R14Q9NYV8 317 aa12.55□□□□□ -0.4
PTPN2-201ENST00000309660 AGPSO00116 658 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 FOXN3O00409 490 aaPredicted RBP12.54□□□□□ -0.4
PTPN2-201ENST00000309660 KRIT1O00522 736 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 KRT14P02533 472 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 ACTN2P35609 894 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 PTGER2P43116 358 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 RARRES1P49788 294 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 MAPK7Q13164 816 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 FAM83AQ86UY5 434 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 METTL13Q8N6R0 699 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 USP38Q8NB14 1042 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 FAM76AQ8TAV0 307 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 WNK4Q96J92 1243 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
PTPN2-201ENST00000309660 ACP6Q9NPH0 428 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 APEX2Q9UBZ4 518 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 LLGL1Q15334 1064 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 PHLDB3Q6NSJ2 640 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 RNF207Q6ZRF8 634 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 HAUS6Q7Z4H7 955 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 MCF2L2Q86YR7 1114 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 CLEC4DQ8WXI8 215 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 ZKSCAN4Q969J2 545 aaPredicted RBP12.54□□□□□ -0.4
PTPN2-201ENST00000309660 BORCS6Q96GS4 357 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 STK33Q9BYT3 514 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 BACH1O14867 736 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 VCAM1P19320 739 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 JAM2P57087 298 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 CETN1Q12798 172 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 ZNF211Q13398 564 aaPredicted RBP12.54□□□□□ -0.4
PTPN2-201ENST00000309660 FOXR1Q6PIV2 292 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 PPM1KQ8N3J5 372 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 AGBL3Q8NEM8 1001 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 SLC20A1Q8WUM9 679 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 KAT5Q92993 513 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 ATG4CQ96DT6 458 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 FAM84AQ96KN4 292 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 AGO4Q9HCK5 861 aaKnown RBP12.54□□□□□ -0.4
PTPN2-201ENST00000309660 RSPH14Q9UHP6 348 aa12.54□□□□□ -0.4
PTPN2-201ENST00000309660 NOC2LQ9Y3T9 749 aaKnown RBP12.54□□□□□ -0.4
PTPN2-201ENST00000309660 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 BUB1BO60566 1050 aaPredicted RBP12.53□□□□□ -0.4
PTPN2-201ENST00000309660 ITGA4P13612 1032 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 KCNA3P22001 575 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 GUCY2CP25092 1073 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 COPB2P35606 906 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 PRKCIP41743 596 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 HSD17B4P51659 736 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 ZNF131P52739 623 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 MAP2K1Q02750 393 aaPredicted RBP12.53□□□□□ -0.4
PTPN2-201ENST00000309660 ITIH3Q06033 890 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 PAK2Q13177 524 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 C10orf76Q5T2E6 689 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 CFAP58Q5T655 872 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 MAATS1Q7Z4T9 603 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 SLC35G2Q8TBE7 412 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 RNF14Q9UBS8 474 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 COL4A5P29400 1685 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 WDR46O15213 610 aaKnown RBP12.53□□□□□ -0.4
PTPN2-201ENST00000309660 VAMP7P51809 220 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 PPP3CAQ08209 521 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 BAATQ14032 418 aaPredicted RBP12.53□□□□□ -0.4
PTPN2-201ENST00000309660 NBPF12Q5TAG4 269 aaPredicted RBP12.53□□□□□ -0.4
PTPN2-201ENST00000309660 CASKIN2Q8WXE0 1202 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 THAP2Q9H0W7 228 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 IGSF9BQ9UPX0 1349 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 PGRMC1O00264 195 aaKnown RBP12.53□□□□□ -0.4
PTPN2-201ENST00000309660 ZBED4O75132 1171 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN2-201ENST00000309660 ATP1A2P50993 1020 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 EMBQ6PCB8 327 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 GOLGA5Q8TBA6 731 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 LMBR1Q8WVP7 490 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 ACCSQ96QU6 501 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 POP1Q99575 1024 aaKnown RBP12.53□□□□□ -0.4
PTPN2-201ENST00000309660 MKNK1Q9BUB5 465 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 HSPBP1Q9NZL4 362 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 AMFRQ9UKV5 643 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
PTPN2-201ENST00000309660 DHX15O43143 795 aaKnown RBP12.52□□□□□ -0.4
PTPN2-201ENST00000309660 TBC1D12O60347 775 aa12.52□□□□□ -0.4
PTPN2-201ENST00000309660 LMNB1P20700 586 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms