RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 HLA-CQ95604 372 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 ZFP42Q96MM3 310 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 AGXT2Q9BYV1 514 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 DDX19AQ9NUU7 478 aaKnown RBP6.29□□□□□ -1.4
PATL1-201ENST00000300146 BARX2Q9UMQ3 279 aaPredicted RBP6.29□□□□□ -1.4
PATL1-201ENST00000300146 PCDHA2Q9Y5H9 948 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 COL4A3BPQ9Y5P4 624 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 LAMA4Q16363 1823 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 ESYT2A0FGR8 921 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 LINC01565O15544 149 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 B4GALT5O43286 388 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 LPXNO60711 386 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 STAG3L1P0CL83 205 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 GPIHBP1Q8IV16 184 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 ADAMTS19Q8TE59 1207 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 BICD1Q96G01 975 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 FAM167AQ96KS9 214 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 ZSWIM4Q9H7M6 989 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 MINDY3Q9H8M7 445 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 PCDHB12Q9Y5F1 795 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 MTCH2Q9Y6C9 303 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 F5P12259 2224 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 IDEP14735 1019 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 DLX2Q07687 328 aaPredicted RBP6.29□□□□□ -1.4
PATL1-201ENST00000300146 NCBP1Q09161 790 aaKnown RBP6.29□□□□□ -1.4
PATL1-201ENST00000300146 EMC2Q15006 297 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 FBXO18Q8NFZ0 1043 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 ZSCAN31Q96LW9 406 aaPredicted RBP6.29□□□□□ -1.4
PATL1-201ENST00000300146 GAD1Q99259 594 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 RIT2Q99578 217 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 POLR3FQ9H1D9 316 aaPredicted RBP6.29□□□□□ -1.4
PATL1-201ENST00000300146 TMX1Q9H3N1 280 aa6.29□□□□□ -1.4
PATL1-201ENST00000300146 TPRP12270 2363 aaKnown RBP6.29□□□□□ -1.4
PATL1-201ENST00000300146 ALPK3Q96L96 1907 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 MAGEB2O15479 319 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 SFNP31947 248 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 LINC01599Q8WXQ3 324 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 SLC5A5Q92911 643 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 TMEM169Q96HH4 297 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 RNF39Q9H2S5 420 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 ANKFY1Q9P2R3 1169 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 PUF60Q9UHX1 559 aaKnown RBP6.28□□□□□ -1.4
PATL1-201ENST00000300146 KIF3AQ9Y496 699 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 DOCK5Q9H7D0 1870 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 EVPLQ92817 2033 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 NPHP3-ACAD11A0A0J9YXS1 232 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 SMIM35A0A1B0GVV1 85 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 MED24O75448 989 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 SLITRK3O94933 977 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 CYP3A4P08684 503 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 OR52Z1P0C646 297 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 IL9P15248 144 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 RFC2P35250 354 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 GPC3P51654 580 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 PEX3P56589 373 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 HMGN5P82970 282 aaKnown RBP6.28□□□□□ -1.4
PATL1-201ENST00000300146 LAMTOR4Q0VGL1 99 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 TRAF7Q6Q0C0 670 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 DYMQ7RTS9 669 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 PALB2Q86YC2 1186 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 DEPTORQ8TB45 409 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 SH3GLB2Q9NR46 395 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 GPR179Q6PRD1 2367 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 NFASCO94856 1347 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 BAIAP3O94812 1187 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 UBA7P41226 1012 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 KRT79Q5XKE5 535 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 GLB1LQ6UWU2 654 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 TMC5Q6UXY8 1006 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 DTHD1Q6ZMT9 781 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 SLC24A5Q71RS6 500 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 ETNPPLQ8TBG4 499 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 MTRQ99707 1265 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 MAFBQ9Y5Q3 323 aaPredicted RBP6.28□□□□□ -1.4
PATL1-201ENST00000300146 MYH15Q9Y2K3 1946 aa6.28□□□□□ -1.4
PATL1-201ENST00000300146 CASTOR2A6NHX0 329 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 F8W810 466 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 I3L4J1 428 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 NPTXRO95502 500 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 RPL17P18621 184 aaKnown RBP6.27□□□□□ -1.41
PATL1-201ENST00000300146 BMPR1AP36894 532 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 SCNN1GP51170 649 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 MRPS5P82675 430 aaKnown RBP6.27□□□□□ -1.41
PATL1-201ENST00000300146 EPHA7Q15375 998 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 PTPROQ16827 1216 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 PADI6Q6TGC4 694 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 ADGRD2Q7Z7M1 963 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 CATSPER3Q86XQ3 398 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 ERMNQ8TAM6 284 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 CLIC6Q96NY7 704 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 KIF2CQ99661 725 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 EIF2AQ9BY44 585 aaKnown RBP6.27□□□□□ -1.41
PATL1-201ENST00000300146 SH2B1Q9NRF2 756 aaPredicted RBP6.27□□□□□ -1.41
PATL1-201ENST00000300146 GREB1LQ9C091 1923 aaPredicted RBP6.27□□□□□ -1.41
PATL1-201ENST00000300146 IGSF9BQ9UPX0 1349 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.27□□□□□ -1.41
PATL1-201ENST00000300146 ZBTB42B2RXF5 422 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 SFPQP23246 707 aaKnown RBP eCLIP6.27□□□□□ -1.41
PATL1-201ENST00000300146 CIITAP33076 1130 aa6.27□□□□□ -1.41
PATL1-201ENST00000300146 CRYBB1P53674 252 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms