RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PGM2Q96G03 612 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 RUNDC3BQ96NL0 473 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 RAB3IPQ96QF0 476 aaPredicted RBP12.3□□□□□ -0.44
TRUB1-201ENST00000298746 TSC22D3Q99576 134 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 SH3GL3Q99963 347 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 PITPNM3Q9BZ71 974 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 METTL14Q9HCE5 456 aaKnown RBP12.3□□□□□ -0.44
TRUB1-201ENST00000298746 PASKQ96RG2 1323 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 GJC1P36383 396 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 RPL21P46778 160 aaKnown RBP12.29□□□□□ -0.44
TRUB1-201ENST00000298746 DHX34Q14147 1143 aaKnown RBP12.29□□□□□ -0.44
TRUB1-201ENST00000298746 TLDC1Q6P9B6 456 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 ZNF804BA4D1E1 1349 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 CHMP2AO43633 222 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 NTSR2O95665 410 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 TRIM49P0CI25 452 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 TRIM49CP0CI26 452 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 CREB1P16220 341 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 ZNF131P52739 623 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 GSTO1P78417 241 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 ADAM33Q9BZ11 813 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 SLC12A4Q9UP95 1085 aa12.29□□□□□ -0.44
TRUB1-201ENST00000298746 PODXLO00592 558 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 CYP11B2P19099 503 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 CNGA2Q16280 664 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 ZCWPW2Q504Y3 356 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 DUPD1Q68J44 220 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 CYP4F22Q6NT55 531 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 KCTD1Q719H9 257 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 FRMD5Q7Z6J6 570 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 COL23A1Q86Y22 540 aaPredicted RBP12.28□□□□□ -0.44
TRUB1-201ENST00000298746 ATXN2LQ8WWM7 1075 aaKnown RBP12.28□□□□□ -0.44
TRUB1-201ENST00000298746 CARD9Q9H257 536 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 BHMT2Q9H2M3 363 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 FRMD4BQ9Y2L6 1034 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 KCPQ6ZWJ8 1503 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 AP1G2O75843 785 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 RARAP10276 462 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 BTDP43251 543 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 TSNAXIP1Q2TAA8 658 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 C1orf54Q8WWF1 131 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 ARHGEF26Q96DR7 871 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 NAF1Q96HR8 494 aaKnown RBP12.28□□□□□ -0.44
TRUB1-201ENST00000298746 ZNF570Q96NI8 536 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 CCDC77Q9BR77 488 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 EBF2Q9HAK2 575 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 CTNNAL1Q9UBT7 734 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 MYH1P12882 1939 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 MYH4Q9Y623 1939 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 EME2A4GXA9 379 aaPredicted RBP12.28□□□□□ -0.44
TRUB1-201ENST00000298746 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
TRUB1-201ENST00000298746 ALDH3A1P30838 453 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 CHRNA3P32297 505 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 SOX5P35711 763 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 CTCFP49711 727 aaPredicted RBP12.28□□□□□ -0.44
TRUB1-201ENST00000298746 KYNUQ16719 465 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 UBAP2Q5T6F2 1119 aaKnown RBP12.28□□□□□ -0.44
TRUB1-201ENST00000298746 NSMFQ6X4W1 530 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 LONP2Q86WA8 852 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 ERP27Q96DN0 273 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 NUDCD1Q96RS6 583 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 DHX36Q9H2U1 1008 aaKnown RBP12.28□□□□□ -0.44
TRUB1-201ENST00000298746 AFF2P51816 1311 aa12.28□□□□□ -0.44
TRUB1-201ENST00000298746 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.44
TRUB1-201ENST00000298746 EXOC3O60645 756 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 ECEL1O95672 775 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 FTLP02792 175 aaPredicted RBP12.27□□□□□ -0.44
TRUB1-201ENST00000298746 RSPH10BP0C881 870 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 ADCY8P40145 1251 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 POLE2P56282 527 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 AUHQ13825 339 aaKnown RBP12.27□□□□□ -0.44
TRUB1-201ENST00000298746 ZNF268Q14587 947 aaPredicted RBP12.27□□□□□ -0.44
TRUB1-201ENST00000298746 FBXO33Q7Z6M2 555 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 WDR66Q8TBY9 1149 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 ALG3Q92685 438 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 KRT35Q92764 455 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 HES6Q96HZ4 224 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 SYNGAP1Q96PV0 1343 aa12.27□□□□□ -0.44
TRUB1-201ENST00000298746 DUOX1Q9NRD9 1551 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 KIF3CO14782 793 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 RIPK2O43353 540 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 PHF2O75151 1096 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 TARSP26639 723 aaKnown RBP12.27□□□□□ -0.45
TRUB1-201ENST00000298746 MARCKSL1P49006 195 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 RNASELQ05823 741 aaKnown RBP12.27□□□□□ -0.45
TRUB1-201ENST00000298746 RIPK1Q13546 671 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 TMED2Q15363 201 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 EDRF1Q3B7T1 1238 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 TTBK2Q6IQ55 1244 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 DPP8Q6V1X1 898 aaPredicted RBP12.27□□□□□ -0.45
TRUB1-201ENST00000298746 EXOC3L1Q86VI1 746 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 ATP8B4Q8TF62 1192 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 TMEM237Q96Q45 408 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 REEP2Q9BRK0 252 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 ANKRD2Q9GZV1 360 aa12.27□□□□□ -0.45
TRUB1-201ENST00000298746 USP40Q9NVE5 1235 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms