RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 COL25A1Q9BXS0 654 aaPredicted RBP10.95□□□□□ -0.66
CCDC58-201ENST00000291458 FTHL17Q9BXU8 183 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 MRPL42Q9Y6G3 142 aaKnown RBP10.95□□□□□ -0.66
CCDC58-201ENST00000291458 COL6A3P12111 3177 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 PLXNA4Q9HCM2 1894 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 TBKBP1A7MCY6 615 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 ZBTB39O15060 712 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 STBD1O95210 358 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 STAG3L1P0CL83 205 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 FGFR1P11362 822 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 QARSP47897 775 aaKnown RBP10.94□□□□□ -0.66
CCDC58-201ENST00000291458 SARSP49591 514 aaKnown RBP10.94□□□□□ -0.66
CCDC58-201ENST00000291458 GPC3P51654 580 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 CRYBB1P53674 252 aaPredicted RBP10.94□□□□□ -0.66
CCDC58-201ENST00000291458 PRSS12P56730 875 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 HMGN5P82970 282 aaKnown RBP10.94□□□□□ -0.66
CCDC58-201ENST00000291458 LONRF3Q496Y0 759 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 XKR9Q5GH70 373 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 MCTP1Q6DN14 999 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 KSR1Q8IVT5 923 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 SLFN12Q8IYM2 578 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 LINC01465Q8N7H1 131 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 IL27Q8NEV9 243 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
CCDC58-201ENST00000291458 LLPHQ9BRT6 129 aaKnown RBP10.94□□□□□ -0.66
CCDC58-201ENST00000291458 TMEM60Q9H2L4 133 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 ADAMTS10Q9H324 1103 aa10.94□□□□□ -0.66
CCDC58-201ENST00000291458 TTC12Q9H892 705 aaPredicted RBP10.94□□□□□ -0.66
CCDC58-201ENST00000291458 SUCLA2Q9P2R7 463 aaPredicted RBP10.94□□□□□ -0.66
CCDC58-201ENST00000291458 A0A087WZ62 844 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 TBX3O15119 743 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 GPR182O15218 404 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 P4HBP07237 508 aaKnown RBP10.93□□□□□ -0.66
CCDC58-201ENST00000291458 YWHABP31946 246 aaKnown RBP10.93□□□□□ -0.66
CCDC58-201ENST00000291458 KCNQ1P51787 676 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 EMC2Q15006 297 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 EPHA7Q15375 998 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 TARBP2Q15633 366 aaKnown RBP10.93□□□□□ -0.66
CCDC58-201ENST00000291458 TTC38Q5R3I4 469 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 FAM102BQ5T8I3 360 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 TMEM143Q96AN5 459 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 FDXACB1Q9BRP7 624 aaPredicted RBP10.93□□□□□ -0.66
CCDC58-201ENST00000291458 NIFKQ9BYG3 293 aaKnown RBP10.93□□□□□ -0.66
CCDC58-201ENST00000291458 RC3H2Q9HBD1 1191 aaKnown RBP10.93□□□□□ -0.66
CCDC58-201ENST00000291458 CYP26B1Q9NR63 512 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 PCDHB7Q9Y5E2 793 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 SQORQ9Y6N5 450 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 CHD9Q3L8U1 2897 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 CDH23Q9H251 3354 aa10.93□□□□□ -0.66
CCDC58-201ENST00000291458 GPR37O15354 613 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 USO1O60763 962 aaKnown RBP10.92□□□□□ -0.66
CCDC58-201ENST00000291458 DGKIO75912 1065 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 DARSP14868 501 aaKnown RBP10.92□□□□□ -0.66
CCDC58-201ENST00000291458 DNM2P50570 870 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 PROX2Q3B8N5 592 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 ODR4Q5SWX8 454 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 MAEAQ7L5Y9 396 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 PIGOQ8TEQ8 1089 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 SLC7A3Q8WY07 619 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 TMX3Q96JJ7 454 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 GCOM2Q9BZD3 368 aaPredicted RBP10.92□□□□□ -0.66
CCDC58-201ENST00000291458 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
CCDC58-201ENST00000291458 C1orf112Q9NSG2 853 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 NOL7Q9UMY1 257 aaKnown RBP10.92□□□□□ -0.66
CCDC58-201ENST00000291458 PCDHA12Q9UN75 941 aa10.92□□□□□ -0.66
CCDC58-201ENST00000291458 PIN4Q9Y237 131 aaKnown RBP10.92□□□□□ -0.66
CCDC58-201ENST00000291458 CHD7Q9P2D1 2997 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 MYO7AQ13402 2215 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 C9IYK1 514 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 GRM6O15303 877 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 DKC1O60832 514 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 MAFO75444 373 aaPredicted RBP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 OR52Z1P0C646 297 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 SRGAP2CP0DJJ0 459 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 ZSCAN20P17040 1043 aaPredicted RBP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 EIF4BP23588 611 aaKnown RBP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 GJB2P29033 226 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 TECP42680 631 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 PTPROQ16827 1216 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 TCEAL5Q5H9L2 206 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 TWF2Q6IBS0 349 aaKnown RBP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 SLC24A5Q71RS6 500 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 CATSPER4Q7RTX7 472 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 NOSTRINQ8IVI9 506 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 CMTR2Q8IYT2 770 aaKnown RBP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 FBXO18Q8NFZ0 1043 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 ZNF689Q96CS4 500 aaPredicted RBP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 SAMD11Q96NU1 681 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 NECAB3Q96P71 396 aaPredicted RBP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 CEP89Q96ST8 783 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 MTRQ99707 1265 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 C11orf84Q9BUA3 381 aaPredicted RBP10.91□□□□□ -0.66
CCDC58-201ENST00000291458 ZSWIM4Q9H7M6 989 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 ATP6V0A4Q9HBG4 840 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 RGS18Q9NS28 235 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms