RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 POLR3GO15318 223 aaPredicted RBP20.78■□□□□ 0.92
SHF-201ENST00000290894 EVI5O60447 810 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 GCLMP48507 274 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 JAK3P52333 1124 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 ALKBH5Q6P6C2 394 aaKnown RBP20.78■□□□□ 0.92
SHF-201ENST00000290894 INTS2Q9H0H0 1204 aaKnown RBP20.78■□□□□ 0.92
SHF-201ENST00000290894 ZCCHC17Q9NP64 241 aaKnown RBP20.78■□□□□ 0.92
SHF-201ENST00000290894 AFG3L2Q9Y4W6 797 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 PCDHA10Q9Y5I2 948 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 C19orf81C9J6K1 198 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 POTEB2H3BUK9 544 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 VGLL4Q14135 290 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 DRAP1Q14919 205 aaPredicted RBP20.78■□□□□ 0.92
SHF-201ENST00000290894 NFIL3Q16649 462 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 CEP170P1Q96L14 293 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 ACCSQ96QU6 501 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 LUC7LQ9NQ29 371 aaKnown RBP20.78■□□□□ 0.92
SHF-201ENST00000290894 ADAMTS5Q9UNA0 930 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 EMSYQ7Z589 1322 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 WDR81Q562E7 1941 aa20.78■□□□□ 0.92
SHF-201ENST00000290894 GTPBP10A4D1E9 387 aaKnown RBP20.77■□□□□ 0.92
SHF-201ENST00000290894 USP2O75604 605 aaPredicted RBP20.77■□□□□ 0.92
SHF-201ENST00000290894 LYPLA2O95372 231 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 FDX1P10109 184 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 KCNA2P16389 499 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 CNTN2Q02246 1040 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 PPP3CAQ08209 521 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 GPC2Q8N158 579 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 BSNDQ8WZ55 320 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 ELMO3Q96BJ8 720 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 INPP4AQ96PE3 977 aaPredicted RBP20.77■□□□□ 0.92
SHF-201ENST00000290894 PLEKHA4Q9H4M7 779 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 ACAD9Q9H845 621 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 HSPBP1Q9NZL4 362 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 HYOU1Q9Y4L1 999 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 F8VZ95 297 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 SFNP31947 248 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 NOP2P46087 812 aaKnown RBP20.77■□□□□ 0.92
SHF-201ENST00000290894 CCDC181Q5TID7 509 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 PHLDB3Q6NSJ2 640 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.77■□□□□ 0.92
SHF-201ENST00000290894 CCDC125Q86Z20 511 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 GOLGA5Q8TBA6 731 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 HDAC7Q8WUI4 952 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 SAAL1Q96ER3 474 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 C12orf42Q96LP6 360 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 PRDM4Q9UKN5 801 aa20.77■□□□□ 0.92
SHF-201ENST00000290894 ADM5C9JUS6 153 aa20.76■□□□□ 0.91
SHF-201ENST00000290894 GLYCTKQ8IVS8 523 aa20.76■□□□□ 0.91
SHF-201ENST00000290894 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
SHF-201ENST00000290894 RNF10Q8N5U6 811 aaKnown RBP20.76■□□□□ 0.91
SHF-201ENST00000290894 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.76■□□□□ 0.91
SHF-201ENST00000290894 PLEKHO2Q8TD55 490 aa20.76■□□□□ 0.91
SHF-201ENST00000290894 U2AF1L4Q8WU68 220 aaKnown RBP20.76■□□□□ 0.91
SHF-201ENST00000290894 USP20Q9Y2K6 914 aa20.76■□□□□ 0.91
SHF-201ENST00000290894 ANKRD63C9JTQ0 380 aa20.76■□□□□ 0.91
SHF-201ENST00000290894 DDX3XO00571 662 aaKnown RBP eCLIP20.76■□□□□ 0.914e-7■■□□□ 14.2
SHF-201ENST00000290894 KRT13P13646 458 aa20.76■□□□□ 0.91
SHF-201ENST00000290894 SP2Q02086 613 aa20.76■□□□□ 0.91
SHF-201ENST00000290894 TMEM206Q9H813 350 aa20.76■□□□□ 0.91
SHF-201ENST00000290894 JPH1Q9HDC5 661 aaPredicted RBP20.76■□□□□ 0.91
SHF-201ENST00000290894 GRID2IPA4D2P6 1211 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 STAT1P42224 750 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 NPTX2P47972 431 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 SLC7A5Q01650 507 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 TXLNBQ8N3L3 684 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 ZNF526Q8TF50 670 aaPredicted RBP20.75■□□□□ 0.91
SHF-201ENST00000290894 CCDC127Q96BQ5 260 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 GPRASP2Q96D09 838 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 FAM84AQ96KN4 292 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 GPR88Q9GZN0 384 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 SEPT9Q9UHD8 586 aaPredicted RBP20.75■□□□□ 0.91
SHF-201ENST00000290894 ERLIN1O75477 346 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 LMNB1P20700 586 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 PRKCIP41743 596 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 VAMP7P51809 220 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 GTF2BQ00403 316 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 SMC1AQ14683 1233 aaKnown RBP20.75■□□□□ 0.91
SHF-201ENST00000290894 PPP2R5AQ15172 486 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 CBWD2Q8IUF1 395 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 SLC9A9Q8IVB4 645 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 SPATA4Q8NEY3 305 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 SEPT11Q9NVA2 429 aaKnown RBP20.75■□□□□ 0.91
SHF-201ENST00000290894 APEX2Q9UBZ4 518 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 BZW2Q9Y6E2 419 aaKnown RBP20.75■□□□□ 0.91
SHF-201ENST00000290894 SNCAIPQ9Y6H5 919 aa20.75■□□□□ 0.91
SHF-201ENST00000290894 DENND3A2RUS2 1198 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 ADRB2P07550 413 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 MYBL2P10244 700 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 TCP1P17987 556 aaKnown RBP20.74■□□□□ 0.91
SHF-201ENST00000290894 ADSSP30520 456 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 SOX5P35711 763 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 TUBB4BP68371 445 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 SUPT20HL1Q3ZLR7 823 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 ZNF746Q6NUN9 644 aaPredicted RBP20.74■□□□□ 0.91
SHF-201ENST00000290894 SAMD3Q8N6K7 520 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 XXYLT1Q8NBI6 393 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 POP1Q99575 1024 aaKnown RBP20.74■□□□□ 0.91
SHF-201ENST00000290894 LRRC1Q9BTT6 524 aa20.74■□□□□ 0.91
SHF-201ENST00000290894 HOXC10Q9NYD6 342 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms