RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ECHDC2Q86YB7 292 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 MMTAG2Q9BU76 263 aaKnown RBP13.82□□□□□ -0.2
HERC6-202ENST00000273960 PITPNM3Q9BZ71 974 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 IKZF4Q9H2S9 585 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 CUEDC2Q9H467 287 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 FLT1P17948 1338 aa13.82□□□□□ -0.2
HERC6-202ENST00000273960 SMCO2A6NFE2 343 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CLIC2O15247 247 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 UFL1O94874 794 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 TDP2O95551 362 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CALM1P0DP23 149 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CALM2P0DP24 149 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CALM3P0DP25 149 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 MECOMQ03112 1051 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CUL3Q13618 768 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 MPP2Q14168 576 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CRAMP1Q96RY5 1269 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 RGL1Q9NZL6 768 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 USP54Q70EL1 1684 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 MYH2Q9UKX2 1941 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 A0A1W2PRG0 241 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CCDC188H7C350 402 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 SMAPO00193 183 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CETN3O15182 167 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 USP17L8P0C7I0 530 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 FGFR2P21802 821 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 PEX5P50542 639 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 SLMAPQ14BN4 828 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 C6orf118Q5T5N4 469 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CRNKL1Q9BZJ0 848 aaKnown RBP13.81□□□□□ -0.2
HERC6-202ENST00000273960 NYXQ9GZU5 481 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 KIAA1683Q9H0B3 1180 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 ARHGEF3Q9NR81 526 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 AJAP1Q9UKB5 411 aaPredicted RBP13.81□□□□□ -0.2
HERC6-202ENST00000273960 PCDHB13Q9Y5F0 798 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 TNNI2P48788 182 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 EIF6P56537 245 aaKnown RBP13.81□□□□□ -0.2
HERC6-202ENST00000273960 GRB10Q13322 594 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 TAOK1Q7L7X3 1001 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CPNE8Q86YQ8 564 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 MFN1Q8IWA4 741 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 SEPT12Q8IYM1 358 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 FAM13CQ8NE31 585 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 SLC35G2Q8TBE7 412 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 CTNNBL1Q8WYA6 563 aaPredicted RBP13.81□□□□□ -0.2
HERC6-202ENST00000273960 RNPEPL1Q9HAU8 725 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 BLOC1S4Q9NUP1 217 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 DCTN4Q9UJW0 460 aa13.81□□□□□ -0.2
HERC6-202ENST00000273960 ZNF804BA4D1E1 1349 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 GSTTP1A0A1W2PQM5 241 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 TCRBV7S2A1N4TA0A589 114 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 LRRN2O75325 713 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 PIAS1O75925 651 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 KCNA3P22001 575 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 CALB2P22676 271 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 ALDH3A1P30838 453 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 SETDB1Q15047 1291 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 KYNUQ16719 465 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 FAM26FQ5R3K3 315 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 GORASP1Q9BQQ3 440 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 MTRF1LQ9UGC7 380 aaKnown RBP13.8□□□□□ -0.2
HERC6-202ENST00000273960 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 E9PMD0 336 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 ZNF746Q6NUN9 644 aaPredicted RBP13.8□□□□□ -0.2
HERC6-202ENST00000273960 NT5DC3Q86UY8 548 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 LRRC57Q8N9N7 239 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 ITFG2Q969R8 447 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 GBP5Q96PP8 586 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 MXD3Q9BW11 206 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 SLITRK6Q9H5Y7 841 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 IGSF9BQ9UPX0 1349 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 PEX11AO75192 247 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 FLOT1O75955 427 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 LDHBP07195 334 aaKnown RBP13.8□□□□□ -0.2
HERC6-202ENST00000273960 NR2F2P24468 414 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 DCAF12L1Q5VU92 463 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 PHLDB2Q86SQ0 1253 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
HERC6-202ENST00000273960 BCAS3Q9H6U6 928 aa13.8□□□□□ -0.2
HERC6-202ENST00000273960 ALG13Q9NP73 1137 aaKnown RBP13.8□□□□□ -0.2
HERC6-202ENST00000273960 FAM196BA6NMK8 535 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 ATP9AO75110 1047 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 TPBGLP0DKB5 382 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 UCHL3P15374 230 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 COASYQ13057 564 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 PDCD2Q16342 344 aaPredicted RBP13.79□□□□□ -0.2
HERC6-202ENST00000273960 CALCRLQ16602 461 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 CYP4F22Q6NT55 531 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 ALG3Q92685 438 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 KRT35Q92764 455 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 CYTH2Q99418 400 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 NT5C3AQ9H0P0 336 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 RXFP1Q9HBX9 757 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms